source: orange-bioinformatics @ 1463:db9a1466b8c0

Name Size Rev Age Author Last Change
doc 1347:dd168923331f   2 years ales.erjavec Added some docstrings, added results parsing in the module level …
widgets 1462:ee4cee02fb85   2 years markotoplak Bioinformatics widgets name changes, new icon for GeneMANIA.
addon.xml 2.7 KB 1463:db9a1466b8c0   2 years www-data Automated manifest update.
geo2orange.py 2.6 KB 188:3458ba1890b3   5 years tomaz.curk Genomics is merged from trunk:5391 to Qt4
MANIFEST.in 81 bytes 1420:b6b5ec5b1dae   2 years ales.erjavec Modified the setup.py script. Added MANIFEST.in and README.txt files.
obiArrayExpress.py 55.2 KB 1440:dd095aafafb8   2 years ales.erjavec Added persistent caching for Gene Atlas Tissue expression widget.
obiAssess.py 21.9 KB 1414:dce40883479a   2 years markotoplak obiAssess: removed test case printouts
obiBioMart.py 38.0 KB 1310:c5ff4f889cba   2 years ales.erjavec - separated the cache for meta data and query data - moved scroll bars …
obiChem.py 49.7 KB 1320:7e848c3e6ae5   2 years ales.erjavec - can use bkchem.oasa if oasa library not installed as a standalone …
obiData.py 9.8 KB 1356:a531fa6d7ae4   2 years ales.erjavec Added listdir method to obiData.FtpDownloader. Use listdir in …
obiDicty.py 45.2 KB 1377:4627c588c750   2 years markotoplak There was a bug in my last commit. Fixed
obiDifscale.py 12.9 KB 1450:6c2b050c2c2a   2 years lan.zagar Updated.
obiExpression.py 32.0 KB 1385:b4403b620014   2 years ales.erjavec Changed the way target labels are selected by the user in Vulcano Plot.
obiGene.py 27.4 KB 1438:90a65dce88f0   2 years ales.erjavec Added ensembl gene matcher.
obiGeneMania.py 14.1 KB 1288:92b3c3aa7ec6   2 years ales.erjavec - added network tab parsing (contains contributions of individual networks …
obiGeneSets.py 15.1 KB 1216:167e6a623644   3 years markotoplak obiGeneSets: uploading gene sets - do not quit on exception
obiGenomicsUpdate.py 7.0 KB 550:6c1db8e91f12   5 years ales.erjavec
obiGEO.py 14.3 KB 1458:fe71c731c487   2 years ales.erjavec Added iter and contains methods to GDSInfo (fixes #831).
obiGO.py 58.8 KB 1422:2b381e58061b   2 years markotoplak obiGO: GetEnrichedTerms uses all aspects by default.
obiGsea.py 32.2 KB 1173:b27aa0a1129f   3 years markotoplak GSEA: catch dicty (to join gene matchers) by its tax id.
obiHomoloGene.py 6.9 KB 1114:260305c1b794   3 years ales.erjavec
obiKEGG.py 41.8 KB 1356:a531fa6d7ae4   2 years ales.erjavec Added listdir method to obiData.FtpDownloader. Use listdir in …
obiMeSH.py 30.8 KB 968:53878a9bfef9   4 years crtomir.gorup Function getCIDs works correctly.
obimiRNA.py 14.7 KB 1424:56f4abf21046   2 years ales.erjavec Added support for loading miRNA targets from microCosm files.
obiOMIM.py 3.1 KB 1007:53a832efb6c9   4 years ales.erjavec - added doc strings
obiOntology.py 28.5 KB 1355:cfa7394cb76b   2 years ales.erjavec Added to_networkx and to_graphviz methods.
obiPPI.py 33.2 KB 1358:9a410c550601   2 years ales.erjavec Added a new base interface for all protein-protein interaction databases. …
obiProb.py 4.0 KB 1146:a5a9d6f58423   3 years tomaz.curk
obiTaxonomy.py 14.0 KB 880:c9a023b32977   4 years ales.erjavec
post_install_script.py 877 bytes 812:087df3c8dfb9   4 years ales.erjavec - added update_by_tags call
pstat.py 36.5 KB 62:0e8684f83fec   9 years blaz.zupan no message
README.txt 103 bytes 1420:b6b5ec5b1dae   2 years ales.erjavec Modified the setup.py script. Added MANIFEST.in and README.txt files.
setup.py 2.2 KB 1420:b6b5ec5b1dae   2 years ales.erjavec Modified the setup.py script. Added MANIFEST.in and README.txt files.
stats.py 147.9 KB 62:0e8684f83fec   9 years blaz.zupan no message
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