source: orange-bioinformatics/_bioinformatics @ 1748:3a6c3d41aaee

Name Size Rev Age Author Last Change
../
obiKEGG 1747:fee3c71716ef   12 months markotoplak KEGG organism name finding fixes.
tests 1742:fa3a9e4af7e6   12 months ales.erjavec Code style and docstring fixes.
widgets 1748:3a6c3d41aaee   12 months ales.erjavec Test for the presence of 'self.signalManager'. A default global …
__init__.py 0 bytes 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
geneset.py 4.5 KB 1712:bcd52ead3d93   20 months markotoplak Classes for storing gene set data moved to Orange.bio.geneset. obiGeneSets …
obiArrayExpress.py 59.3 KB 1687:460a66cfdc01   22 months ales.erjavec Basic annotations for data table features (Charecteristics, …
obiAssess.py 21.7 KB 1728:a7d42a8d1ed2   14 months markotoplak Added an option in Assess to not ignore umatchable context.
obiBioMart.py 38.0 KB 1682:2e2c671e4300   22 months lan.zagar Replaced split(\n) with splitlines (closes #1160).
obiChem.py 49.7 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiData.py 9.8 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiDicty.py 57.7 KB 1686:c47c9865d9bc   22 months markotoplak Bump the version of obiDicty buffer.
obiDifscale.py 12.7 KB 1654:61fbdcb67aab   2 years mitar Merge.
obiExperiments.py 4.4 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiExpression.py 32.1 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiGene.py 32.5 KB 1735:50499d1dc55a   13 months ales.erjavec Changed the Organism.gene_aliases method.
obiGeneAtlas.py 23.8 KB 1704:8480e307a8a0   21 months ales.erjavec Fixed wrong relative import.
obiGeneMania.py 31.7 KB 1727:9cb1de35eb56   17 months ales.erjavec Create the destination directory if it does not exist.
obiGeneSets.py 11.8 KB 1719:6e8861564778   20 months markotoplak Fixed update scripts for MeSH, GO, HomoloGene, NCBI_geneinfo, OMIM, PPI. …
obiGeneSetSig.py 20.9 KB 1728:a7d42a8d1ed2   14 months markotoplak Added an option in Assess to not ignore umatchable context.
obiGenomicsUpdate.py 6.7 KB 1716:4c4266f7c5a5   20 months markotoplak Removed the old version of obiKEGG. Renamed obiKEGG2 -> obiKEGG.
obiGEO.py 14.3 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiGO.py 62.3 KB 1716:4c4266f7c5a5   20 months markotoplak Removed the old version of obiKEGG. Renamed obiKEGG2 -> obiKEGG.
obiGsea.py 32.7 KB 1711:643d37885055   20 months markotoplak obiGeneSetSig: speedup of ASSESS.
obiHomoloGene.py 7.0 KB 1682:2e2c671e4300   22 months lan.zagar Replaced split(\n) with splitlines (closes #1160).
obiMeSH.py 30.9 KB 1637:dde4ef52193b   2 years mitar Removing __file__ usage.
obimiRNA.py 14.6 KB 1716:4c4266f7c5a5   20 months markotoplak Removed the old version of obiKEGG. Renamed obiKEGG2 -> obiKEGG.
obiOMIM.py 3.5 KB 1719:6e8861564778   20 months markotoplak Fixed update scripts for MeSH, GO, HomoloGene, NCBI_geneinfo, OMIM, PPI. …
obiOntology.py 30.3 KB 1743:9f18a1e0657c   12 months ales.erjavec Extended term name mangling to all python reserved keywords.
obiPPI.py 45.1 KB 1720:354d91b1af9f   20 months markotoplak Fixed update scripts for STRING and Taxonomy.
obiProb.py 4.6 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiTaxonomy.py 14.1 KB 1720:354d91b1af9f   20 months markotoplak Fixed update scripts for STRING and Taxonomy.
pstat.py 36.5 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
stats.py 147.9 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
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