source: orange-bioinformatics/_bioinformatics @ 1795:663192bd4469

Name Size Rev Age Author Last Change
../
obiKEGG 1760:165df4199ec9   12 months ales.erjavec Optimized DBDatabase batch_get/pre_cache w.r.t. number of separate network …
tests 1742:fa3a9e4af7e6   12 months ales.erjavec Code style and docstring fixes.
widgets 1794:3a530b619d7f   11 months vid.flashpoint Added Cytobands genesets and modified obiOMIM.py. Both need some extra …
__init__.py 0 bytes 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
geneset.py 4.6 KB 1781:764dc2b10839   11 months vid.flashpoint First attempt at configuring Orange server update
obiArrayExpress.py 59.3 KB 1687:460a66cfdc01   22 months ales.erjavec Basic annotations for data table features (Charecteristics, …
obiAssess.py 21.7 KB 1728:a7d42a8d1ed2   14 months markotoplak Added an option in Assess to not ignore umatchable context.
obiBioMart.py 38.0 KB 1682:2e2c671e4300   22 months lan.zagar Replaced split(\n) with splitlines (closes #1160).
obiChem.py 49.7 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiData.py 9.8 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiDicty.py 57.7 KB 1686:c47c9865d9bc   22 months markotoplak Bump the version of obiDicty buffer.
obiDictyMutants.py 8.0 KB 1792:89d57e897273   11 months vid.flashpoint Added a documentation entry for obiDictyMutants.py
obiDifscale.py 12.7 KB 1654:61fbdcb67aab   2 years mitar Merge.
obiExperiments.py 4.4 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiExpression.py 32.1 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiGene.py 32.5 KB 1735:50499d1dc55a   13 months ales.erjavec Changed the Organism.gene_aliases method.
obiGeneAtlas.py 23.8 KB 1704:8480e307a8a0   21 months ales.erjavec Fixed wrong relative import.
obiGeneMania.py 31.7 KB 1727:9cb1de35eb56   17 months ales.erjavec Create the destination directory if it does not exist.
obiGeneSets.py 13.3 KB 1795:663192bd4469   11 months vid.flashpoint Removed obiCytobands.py and created genesets in obiGeneSets.py. …
obiGeneSetSig.py 25.3 KB 1775:023037d1e29a   11 months markotoplak obiGeneSetSig: LLR uses combined standard deviation if a standard …
obiGenomicsUpdate.py 6.7 KB 1716:4c4266f7c5a5   20 months markotoplak Removed the old version of obiKEGG. Renamed obiKEGG2 -> obiKEGG.
obiGEO.py 14.3 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiGO.py 60.6 KB 1771:bf833fa5d2a3   12 months ales.erjavec Fixed 'Ontology' and 'Annotations' stream parsing.
obiGsea.py 32.7 KB 1711:643d37885055   20 months markotoplak obiGeneSetSig: speedup of ASSESS.
obiHomoloGene.py 7.0 KB 1682:2e2c671e4300   22 months lan.zagar Replaced split(\n) with splitlines (closes #1160).
obiMeSH.py 30.9 KB 1637:dde4ef52193b   2 years mitar Removing __file__ usage.
obimiRNA.py 14.6 KB 1716:4c4266f7c5a5   20 months markotoplak Removed the old version of obiKEGG. Renamed obiKEGG2 -> obiKEGG.
obiOMIM.py 3.6 KB 1795:663192bd4469   11 months vid.flashpoint Removed obiCytobands.py and created genesets in obiGeneSets.py. …
obiOntology.py 30.3 KB 1743:9f18a1e0657c   12 months ales.erjavec Extended term name mangling to all python reserved keywords.
obiPPI.py 44.3 KB 1756:ec01f8aa98a9   12 months markotoplak STRING database build: do not unzip files.
obiProb.py 4.6 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
obiTaxonomy.py 14.1 KB 1720:354d91b1af9f   20 months markotoplak Fixed update scripts for STRING and Taxonomy.
pstat.py 36.5 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
stats.py 147.9 KB 1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
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