source: orange-bioinformatics/setup.py @ 1636:10d234fdadb9

Revision 1636:10d234fdadb9, 2.9 KB checked in by mitar, 2 years ago (diff)

Restructuring because we will not be using namespaces.

Line 
1#!/usr/bin/env python
2
3import os
4
5from setuptools import setup, find_packages
6
7NAME = 'Orange-Bioinformatics'
8
9VERSION = '1.1a'
10
11DESCRIPTION = 'Orange Bioinformatics is an add-on for Orange data mining software package.'
12LONG_DESCRIPTION = open(os.path.join(os.path.dirname(__file__), 'README.rst')).read()
13AUTHOR = 'Bioinformatics Laboratory, FRI UL'
14AUTHOR_EMAIL = 'contact@orange.biolab.si'
15URL = 'http://orange.biolab.si/addons/'
16DOWNLOAD_URL = 'https://bitbucket.org/biolab/orange-bioinformatics/downloads'
17LICENSE = 'GPLv3'
18
19KEYWORDS = (
20    'data mining',
21    'machine learning',
22    'artificial intelligence',
23    'bioinformatics',
24    'gene ontology',
25    'KEGG',
26    'expression profiles',
27)
28
29CLASSIFIERS = (
30    'Development Status :: 4 - Beta',
31    'Environment :: X11 Applications :: Qt',
32    'Environment :: Console',
33    'Environment :: Plugins',
34    'Programming Language :: Python',
35    'Framework :: Orange',
36    'License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)',
37    'Operating System :: OS Independent',
38    'Topic :: Scientific/Engineering :: Artificial Intelligence',
39    'Topic :: Scientific/Engineering :: Visualization',
40    'Topic :: Scientific/Engineering :: Bio-Informatics',
41    'Topic :: Software Development :: Libraries :: Python Modules',
42    'Intended Audience :: Education',
43    'Intended Audience :: Science/Research',
44    'Intended Audience :: Developers',
45)
46
47PACKAGES = find_packages(
48    exclude = ('*.tests', '*.tests.*', 'tests.*', 'tests'),
49)
50 
51PACKAGE_DATA = {
52}
53
54SETUP_REQUIRES = (
55)
56
57INSTALL_REQUIRES = (
58    'Orange',
59    'suds',
60    'numpy',
61    'requests',
62    'oasa',
63    'bkchem',
64    'PIL',
65    'networkx',
66    'pygraphviz',
67    # Dependencies which are problematic to install automatically
68    #'PyQt', # No setup.py
69    #'openbabel-python', # You get bindings together with the openbabel library and not stand-alone
70    #'scipy', # Requires Fortran compiler
71    #'matplotlib', # Requires that numpy is installed first
72),
73
74DEPENDENCY_LINKS = (
75    'http://bkchem.zirael.org/download/bkchem-0.13.0.tar.gz',
76    'http://bkchem.zirael.org/download/oasa-0.13.1.tar.gz',
77)
78
79ENTRY_POINTS = {
80    'orange.addons': (
81        'bioinformatics = _bioinformatics',
82    ),
83    'orange.widgets': (
84        'bioinformatics = _bioinformatics.widgets',
85    ),
86}
87
88if __name__ == '__main__':
89    setup(
90        name = NAME,
91        version = VERSION,
92        description = DESCRIPTION,
93        long_description = LONG_DESCRIPTION,
94        author = AUTHOR,
95        author_email = AUTHOR_EMAIL,
96        url = URL,
97        download_url = DOWNLOAD_URL,
98        license = LICENSE,
99        keywords = KEYWORDS,
100        classifiers = CLASSIFIERS,
101        packages = PACKAGES,
102        package_data = PACKAGE_DATA,
103        setup_requires = SETUP_REQUIRES,
104        install_requires = INSTALL_REQUIRES,
105        dependency_links = DEPENDENCY_LINKS,
106        entry_points = ENTRY_POINTS,
107        include_package_data = True,
108        zip_safe = False,
109    )
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