source: orange-bioinformatics @ 1533:8543e989a290

Name Size Rev Age Author Last Change
doc 1347:dd168923331f   3 years ales.erjavec Added some docstrings, added results parsing in the module level …
obiKEGG2 1532:14a377419a09   2 years ales_erjavec Added KEGG interface using web services
tests 1533:8543e989a290   2 years ales_erjavec Added tests dir with unittests for obiKEGG2
widgets 1527:66a207e0663b   2 years ales.erjavec Now using Orange.network.Graph.
addon.xml 2.7 KB 1529:702241c4efb9   2 years www-data Automated manifest update.
geo2orange.py 2.6 KB 188:3458ba1890b3   6 years tomaz.curk Genomics is merged from trunk:5391 to Qt4
MANIFEST.in 81 bytes 1420:b6b5ec5b1dae   3 years ales.erjavec Modified the setup.py script. Added MANIFEST.in and README.txt files.
obiArrayExpress.py 58.3 KB 1530:48dc3a3e2cac   2 years ales_erjavec Fixed docstrings, typos.
obiAssess.py 21.9 KB 1414:dce40883479a   3 years markotoplak obiAssess: removed test case printouts
obiBioMart.py 38.0 KB 1310:c5ff4f889cba   3 years ales.erjavec - separated the cache for meta data and query data - moved scroll bars …
obiChem.py 49.7 KB 1320:7e848c3e6ae5   3 years ales.erjavec - can use bkchem.oasa if oasa library not installed as a standalone …
obiData.py 9.8 KB 1356:a531fa6d7ae4   3 years ales.erjavec Added listdir method to obiData.FtpDownloader. Use listdir in …
obiDicty.py 47.3 KB 1510:058ce9a71723   2 years markotoplak obiDicty: support for coverage.
obiDifscale.py 12.6 KB 1474:b702a3da7f36   3 years ales.erjavec Moved prctile import to where it is needed (in case matplotlib is not …
obiExpression.py 32.0 KB 1385:b4403b620014   3 years ales.erjavec Changed the way target labels are selected by the user in Vulcano Plot.
obiGene.py 30.8 KB 1468:13f7c83ffda0   3 years ales.erjavec Added EnsembleGeneInfo class.
obiGeneAtlas.py 23.1 KB 1500:d7d4664afe01   3 years ales.erjavec Added progress_callback parameter to gene_expression_atlas and …
obiGeneMania.py 32.8 KB 1528:911c336b6c08   2 years ales.erjavec Fixed docstrings (orngNetwork.Network -> Orange.network.Graph)
obiGeneSets.py 15.1 KB 1216:167e6a623644   4 years markotoplak obiGeneSets: uploading gene sets - do not quit on exception
obiGenomicsUpdate.py 7.0 KB 550:6c1db8e91f12   5 years ales.erjavec
obiGEO.py 14.3 KB 1458:fe71c731c487   3 years ales.erjavec Added iter and contains methods to GDSInfo (fixes #831).
obiGO.py 58.8 KB 1422:2b381e58061b   3 years markotoplak obiGO: GetEnrichedTerms uses all aspects by default.
obiGsea.py 32.2 KB 1173:b27aa0a1129f   4 years markotoplak GSEA: catch dicty (to join gene matchers) by its tax id.
obiHomoloGene.py 6.9 KB 1114:260305c1b794   4 years ales.erjavec
obiKEGG.py 41.8 KB 1356:a531fa6d7ae4   3 years ales.erjavec Added listdir method to obiData.FtpDownloader. Use listdir in …
obiMeSH.py 30.8 KB 968:53878a9bfef9   5 years crtomir.gorup Function getCIDs works correctly.
obimiRNA.py 14.7 KB 1424:56f4abf21046   3 years ales.erjavec Added support for loading miRNA targets from microCosm files.
obiOMIM.py 3.5 KB 1519:b5ea81f44308   2 years ales.erjavec Fixed the ncbi omim download path.
obiOntology.py 29.3 KB 1531:54a9507c7ee4   2 years ales_erjavec Added traversal methods, term_by_name.
obiPPI.py 45.1 KB 1517:eeebac5bf699   2 years ales.erjavec Split the source string.
obiProb.py 4.6 KB 1506:beecaafe2d7f   2 years markotoplak obiProb: FDR now allows unsorted lists on input. Regain old performance …
obiTaxonomy.py 14.0 KB 880:c9a023b32977   5 years ales.erjavec
post_install_script.py 877 bytes 812:087df3c8dfb9   5 years ales.erjavec - added update_by_tags call
pstat.py 36.5 KB 62:0e8684f83fec   10 years blaz.zupan no message
README.txt 103 bytes 1420:b6b5ec5b1dae   3 years ales.erjavec Modified the setup.py script. Added MANIFEST.in and README.txt files.
setup.py 2.2 KB 1420:b6b5ec5b1dae   3 years ales.erjavec Modified the setup.py script. Added MANIFEST.in and README.txt files.
stats.py 147.9 KB 62:0e8684f83fec   10 years blaz.zupan no message
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