Changeset 1719:6e8861564778 in orange-bioinformatics for server_update/updateHomoloGene.py


Ignore:
Timestamp:
08/31/12 14:09:46 (20 months ago)
Author:
markotoplak
Branch:
default
Message:

Fixed update scripts for MeSH, GO, HomoloGene, NCBI_geneinfo, OMIM, PPI. Moved wget to Orange.utils.

File:
1 edited

Legend:

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  • server_update/updateHomoloGene.py

    r1717 r1719  
    22##!contact=ales.erjavec@fri.uni-lj.si 
    33 
    4 import obiHomoloGene 
    5 import orngServerFiles 
     4from Orange.bio import obiHomoloGene 
     5import Orange.utils.serverfiles as orngServerFiles 
    66 
    7 import orngEnviron 
     7import Orange.utils.environ as orngEnviron 
    88import os, sys 
    99import gzip, shutil 
     
    1616password = opt.get("-p", opt.get("--password", "password")) 
    1717 
    18 path = os.path.join(orngEnviron.bufferDir, "tmp_HomoloGene") 
     18path = os.path.join(orngEnviron.buffer_dir, "tmp_HomoloGene") 
    1919serverFiles = orngServerFiles.ServerFiles(username, password) 
    2020 
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