source: orange-bioinformatics/_bioinformatics/obiGeneSetSig.py @ 1772:58718fc3f736

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(edit) @1772:58718fc3f736   12 months markotoplak obiGeneSetSig: CORG were build a gene too large (fixed). SetSig has the …
(edit) @1728:a7d42a8d1ed2   14 months markotoplak Added an option in Assess to not ignore umatchable context.
(edit) @1725:1c834422f29e   17 months markotoplak obiGeneSetSig: assess now works even if gene matcher did not perfectly …
(edit) @1723:753e1d554488   18 months markotoplak SetSig uses statc for pearsonr. Around 10x speedup compared to numpy.
(edit) @1711:643d37885055   20 months markotoplak obiGeneSetSig: speedup of ASSESS.
(edit) @1709:d9f0ae5a3c67   21 months markotoplak Speed up PCA and PLS (obiGeneSetSig).
(edit) @1708:c442e936f1ef   21 months markotoplak Another speedup of SetSig. Now it is 30% faster on DLBCL.tab with …
(edit) @1707:7d692228fea1   21 months markotoplak Speed up of setsig (obiGeneSetSig).
(edit) @1705:0b6781662f02   21 months markotoplak obiGsea.takeClasses: now builds a class value with get_value_from.
(edit) @1691:d2aeb3889a90   22 months markotoplak CV feature build for obiGeneSetSig.
(edit) @1690:cba131a6a0c5   22 months markotoplak obiGeneSetSig: small changes in the interface.
(copy) @1636:10d234fdadb9   2 years mitar Restructuring because we will not be using namespaces.
copied from Orange/bioinformatics/obiGeneSetSig.py:
(edit) @1632:9cf919d0f343   2 years mitar Fixing imports.
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