Ticket #418 (closed bug: fixed)

Opened 5 years ago

Last modified 5 years ago

Gene Info se zrusi ob prvem poganjanju na Dicty podatkih

Reported by: blaz Owned by: ales
Milestone: 2.6 Component: orng_modules
Severity: minor Keywords:
Cc: Blocking:
Blocked By:


In sicer to stori, ce mu manjka dictyBase gene aliases. Ideja je, da morajo skripte same poskrbeti, da ce se ta datoteka rabi, da se jo downloada iz serverja.

 File: OWGUI.py, line 1389 in __call__
 Code: self.f(**kwds)
   File: OWGeneInfo.py, line 109 in setItems
   Code: info = obiGene.NCBIGeneInfo(self.organisms[min(self.organismIndex, len(self.organisms) - 1)])
     File: obiGene.py, line 86 in __init__
     Code: self.matcher.set_targets(self.keys())
       File: obiGene.py, line 638 in set_targets
       Code: matcher.set_targets(targets)
         File: obiGene.py, line 444 in set_targets
         Code: MatcherAliases.set_targets(self, targets)
           File: obiGene.py, line 387 in set_targets
           Code: ids = self.to_ids(target)
             File: obiGene.py, line 378 in to_ids
             Code: return self.mdict[gene]
               File: obiGene.py, line 435 in get_mdict
               Code: self.saved_mdict = create_mapping(self.aliases, self.ignore_case)
                 File: obiGene.py, line 426 in get_aliases
                 Code: self.aliases = self.load_aliases()
                   File: obiGene.py, line 466 in load_aliases
                   Code: return self.create_aliases()
                     IOError: [Errno 2] No such file or directory: '/Users/blaz/Library/Caches/orange/bigfiles/dictybase/information_mappings.pck.info'

Change History

comment:1 Changed 5 years ago by ales

  • Status changed from new to closed
  • Resolution set to fixed
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