Timeline


and

03/18/09:

21:38 Changeset in orange [5870:e16b06825ebb] by janezd <janez.demsar@…>
default- random_sort now uses stable_sort to get the same results on all …
18:00 Changeset in orange [5869:a7ab32c51d8d] by janezd <janez.demsar@…>
default
17:58 Changeset in orange [5868:32c2207b50bf] by janezd <janez.demsar@…>
default- RandomGenerator can now give integer randoms in the given range
17:13 Changeset in orange [5867:8c506f1f2302] by janezd <janez.demsar@…>
default
16:39 Changeset in orange-bioinformatics [712:daa111b50644] by blaz <blaz.zupan@…>
defaultadded exact=False to search
16:37 Ticket #370 (exact search in obiTaxonomy) created by blaz
Ali lahko dodas argument exact k funkciji search, tako da (sem ze dodal v …
16:24 Changeset in orange-bioinformatics [711:a7fc14807c72] by blaz <blaz.zupan@…>
defaultfixed an error ( > -> </dt>)
16:21 Changeset in orange-bioinformatics [710:2caf6e6d1dac] by blaz <blaz.zupan@…>
defaulttaxids() added
15:29 Ticket #369 (to_taxid v obiTaxonomy vraca set) created by blaz
V dokumentaciji pise "See if the organism <code>code</code> is a valid …
15:14 Changeset in orange-bioinformatics [709:56505829be32] by blaz <blaz.zupan@…>
defaultregression test, part of obiTaxonomy documentation, initial commit
14:29 Ticket #367 (obiTaxonomy taxids) closed by anonymous
fixed
14:26 Changeset in orange-bioinformatics [708:91da63d9dfde] by ales_erjavec <ales.erjavec@…>
default- added taxids function
14:22 Ticket #368 (ExampleDistance widget crashes when there are too many examples) created by miha
Input was 50.000 examples in example table. Canvas closes, error report: …
14:15 Ticket #367 (obiTaxonomy taxids) created by blaz
V obiTaxonomy dodaj funkcijo taxids(), ki vrne listo seznam vseh tex …
12:29 Changeset in orange-bioinformatics [707:671e9b95c6e4] by blaz <blaz.zupan@…>
defaultadded common_taxid() and essential_taxids()
12:29 Changeset in orange-bioinformatics [706:fbc004a4f25a] by blaz <blaz.zupan@…>
defaultadded common_taxid() and essential_taxids(), and an example
12:16 Ticket #366 (links to update information page from obiTaxonomy documentation) created by blaz
This now says: "These are also the organisms for which the information …
11:50 Ticket #365 (svm-custom-kernel.py crashes) closed by ales
fixed
11:49 Changeset in orange [5866:676d9f5baaa2] by ales_erjavec <ales.erjavec@…>
default

03/17/09:

22:37 Changeset in orange-bioinformatics [705:d71ca1e59393] by markotoplak
defaultGsea: fixed widget to work with precalculated correlations in a single …
18:47 Ticket #365 (svm-custom-kernel.py crashes) created by blaz
Regresijski test na skripti doc/modules/svm-custom-kernel.py javi napako: …
18:20 Ticket #364 (Delete Widget Settings ne zbrise settingsov za add-on-e) created by blaz
Pri instaliranem modulu za bioinformatiko (pri meni se ta zavihek imenuje …
17:53 Changeset in orange-bioinformatics [704:de89ddaec94a] by blaz <blaz.zupan@…>
defaultchanged a few labels in GUI
14:47 Changeset in orange [5865:3b681e7b65f8] by ales_erjavec <ales.erjavec@…>
default
13:00 Changeset in orange [5864:ebb2900be81a] by ales_erjavec <ales.erjavec@…>
default- changed default svm_type to Nu_SVC

03/16/09:

15:44 Ticket #363 (LinearLearner) created by blaz
Ales, ali lahko prosim v dokumentacijo …
14:23 Changeset in orange [5863:d5761017a9b7] by blaz <blaz.zupan@…>
defaultreports on regression script coverage of various modules, initial commit
13:38 Changeset in orange [5862:b43ae51edae4] by blaz <blaz.zupan@…>
defaultnow fully implements testing of text and obi modules
13:31 Changeset in orange [5861:ec55b903521a] by blaz <blaz.zupan@…>
defaultinitial commit of the regression test result for this script
13:30 Changeset in orange [5860:1ab3910ee321] by blaz <blaz.zupan@…>
defaultinitial commit of the regression test result for this script
13:30 Changeset in orange [5859:07f5c1963eb0] by blaz <blaz.zupan@…>
defaultinitial commit of the regression test result for this script
12:49 Changeset in orange [5858:30756e43c3d4] by blaz <blaz.zupan@…>
defaultinitial commit of the regression test result for this script
10:30 Changeset in orange-bioinformatics [703:fc045bd88b54] by ales_erjavec <ales.erjavec@…>
default
10:30 Changeset in orange-bioinformatics [702:df5fa79c2c45] by ales_erjavec <ales.erjavec@…>
default

03/14/09:

21:48 Changeset in orange [5857:715a69b50a78] by blaz <blaz.zupan@…>
defaultthe order of examples that are printed out changed, otherwise looks like …
21:44 Ticket #362 (domainDepot.py crash) created by blaz
doc/reference/domainDepot.py ne dela vec, javi: […]
21:41 Changeset in orange [5856:ad30b1b25cfb] by blaz <blaz.zupan@…>
defaultNumeric -> numpy
18:32 Ticket #361 (basket.py (regression test) crashes) created by blaz
Testna skripta doc/reference/basket.py najde bug: […]
18:24 Changeset in orange [5855:2e2c14f2c5e8] by blaz <blaz.zupan@…>
defaultremoved
18:23 Changeset in orange [5854:3be24c4f08ed] by blaz <blaz.zupan@…>
defaultchanged name from RandomClassifier.py
18:21 Changeset in orange [5853:c64a3d83c3c1] by blaz <blaz.zupan@…>
defaultrandomclassifier.py -> random_classifier.py
18:21 Changeset in orange [5852:2656bccfd12a] by blaz <blaz.zupan@…>
defaultrandomclassifier.py -> random_classifier.py
18:17 Ticket #360 (graph_analyses.py crashes) created by blaz
Testna skripta doc/reference/graph_analyses.py ne dela vec: […]
18:13 Changeset in orange [5851:4c4bcb1a0b86] by blaz <blaz.zupan@…>
defaultthe second part of assoc-rule.py, w/o fancy printout (just for regression …
18:13 Changeset in orange [5850:8c887277ba67] by blaz <blaz.zupan@…>
defaultsplit the script to two parts (this one is just like it used to be)
18:09 Changeset in orange [5849:2cd285a22ce4] by blaz <blaz.zupan@…>
defaultthe second part of assoc-agrawal, w/o fancy printout (just for regression …
18:08 Changeset in orange [5848:10f9b68b5ec8] by blaz <blaz.zupan@…>
defaultsplit the script to two parts (this one is just like it used to be)
12:49 Changeset in orange [5847:1b4716b61fb1] by blaz <blaz.zupan@…>
defaulteverything ok, new code was added to the script (previous part of code ok)
12:45 Changeset in orange [5846:4e5ead016c08] by blaz <blaz.zupan@…>
defaultmoved to doc/modules
12:44 Changeset in orange [5845:850e43d274c6] by blaz <blaz.zupan@…>
defaultmoved from doc/reference and renamed from testRulelearner
12:42 Changeset in orange [5844:c8232c7d1715] by blaz <blaz.zupan@…>
defaultchanged, but not very substantially
12:39 Changeset in orange [5843:226de2ea1f72] by blaz <blaz.zupan@…>
defaultUpper_Filled -> UpperFilled
12:24 Changeset in orange [5842:782920ebb8cb] by blaz <blaz.zupan@…>
defaultreduced precision on the output (to 2 digits)
12:24 Changeset in orange [5841:a521215f39bc] by blaz <blaz.zupan@…>
defaultminor changes
12:23 Changeset in orange [5840:9973bc67bc1d] by blaz <blaz.zupan@…>
defaultchanged number of folds (to 3)
12:06 Changeset in orange [5839:e93e5cd2d985] by blaz <blaz.zupan@…>
defaultscript output changed slightly (precision set to 2 digits)
12:02 Changeset in orange [5838:e4e41c9cae4c] by blaz <blaz.zupan@…>
default< -> =< and >= -> >
12:00 Changeset in orange [5837:949f924fb71c] by blaz <blaz.zupan@…>
defaultminor change (3rd decimal)
11:57 Changeset in orange [5836:2f12faf9946b] by blaz <blaz.zupan@…>
defaultminor changes (3rd decimal)
11:55 Changeset in orange [5835:dfd06e23d4bc] by blaz <blaz.zupan@…>
defaultminor changes in CA of knn, also set precision to 3 digits
11:53 Changeset in orange [5834:0569c0ca4f15] by blaz <blaz.zupan@…>
defaultprecision when reporting classification accuracy set to 3
11:34 Ticket #359 (__dict__ razreda orangeClassifier in dedovanje) created by blaz
Spodnje dela tako kot bi moralo: […] a ce razred izpeljem iz …
10:49 Changeset in orange [5833:0098c3e5b42c] by blaz <blaz.zupan@…>
defaultchanges due to changes in the script (shorter runtime)
10:42 Changeset in orange [5832:f9cc86f9ae2d] by blaz <blaz.zupan@…>
defaultminor changes in tree size (hope it stabilizes here)
08:36 Changeset in orange [5831:ce624b9456ad] by blaz <blaz.zupan@…>
default< -> =< and >= -> >
02:38 Ticket #357 (levoklik na canvasu) closed by janez
fixed
02:37 Changeset in orange [5830:b3280a7d0962] by janezd <janez.demsar@…>
default- widget popups now only appear on right click

03/13/09:

18:04 Changeset in orange [5829:e85c41dd8311] by blaz <blaz.zupan@…>
defaulthelp() -> usage()
17:31 Changeset in orange [5828:8dc83a6449aa] by janezd <janez.demsar@…>
default- changed version to 2.0b
17:25 Ticket #358 (Vrstica About v Canvasu) created by blaz
Gregor, lahko prosim vkljucis (na primerno mesto, na Macu je to npr. v …
17:20 Ticket #357 (levoklik na canvasu) created by blaz
Pri nacinu "Canvas Popups" naj levi klik na praznem canvas-u vec ne odpira …
17:12 Changeset in orange [5827:87bd2b5405eb] by blaz <blaz.zupan@…>
defaultminor changes
16:28 Changeset in orange [5826:df7d1cdccdf1] by blaz <blaz.zupan@…>
defaultcommand-line argument handling changed, and so did argument names

03/12/09:

17:59 Changeset in orange [5825:5299bcc71004] by blaz <blaz.zupan@…>
defaultcorrected a few (new) bugs
17:50 Changeset in orange [5824:ef56e92a07ad] by blaz <blaz.zupan@…>
defaultrenamed the folder with results (removed the "-output")
17:42 Changeset in orange [5823:2a0e58325f19] by blaz <blaz.zupan@…>
defaultmoved the files with results to results subdirectory (subdirectory …
14:32 Changeset in orange [5822:ea533518f12d] by gregor <gregor@…>
default
11:11 Changeset in orange [5821:0288e515ec42] by blaz <blaz.zupan@…>
defaultsome numbers changed slightly
11:10 Changeset in orange [5820:1bd2fbfac942] by blaz <blaz.zupan@…>
defaultsome numbers changed slightly
11:09 Changeset in orange [5819:69f63159a4e2] by blaz <blaz.zupan@…>
defaulttree thresholds changed from >= to <= (minor differences)
11:09 Changeset in orange [5818:07f7fbebdb87] by blaz <blaz.zupan@…>
defaultminor changes (in output)

03/11/09:

11:58 Changeset in orange [5817:44193e902c3e] by ales_erjavec <ales.erjavec@…>
default

03/10/09:

21:21 Changeset in orange [5816:8f7345de07ee] by blaz <blaz.zupan@…>
defaultadded a couple of docstrings
15:06 Changeset in orange-bioinformatics [701:55046d233d93] by ales_erjavec <ales.erjavec@…>
default- added focus out to Filter controls
15:04 Changeset in orange [5815:cc95a5c31786] by ales_erjavec <ales.erjavec@…>
default- added DoubleSpinBoxWFocusOut
14:09 Ticket #356 (warning "previous session was not closed successfully" misplaced) created by blaz
Odprem canvas, zlozim eno shemo, shranim, grem vem (ko to naredim me …
10:08 Ticket #354 (GO Enrichment Analysis (Filter)) reopened by blaz
Ales, tole se ne dela dobro. Prosim, za obe polji, uporabi kontrolo ki …

03/09/09:

15:01 Changeset in orange [5814:9fb933523870] by ales_erjavec <ales.erjavec@…>
default- fixed trac ticket #355
12:26 Ticket #354 (GO Enrichment Analysis (Filter)) closed by anonymous
fixed
12:17 Changeset in orange-bioinformatics [700:82373444bcf7] by ales_erjavec <ales.erjavec@…>
default-changed slider controls in filter box to spin boxes

03/08/09:

20:26 Ticket #355 (OWDistributions crkne na string attributih) created by blaz
In sicer kot kaze samo, ce so ti na zacetku liste atributov, ce so zadaj, …
20:11 Ticket #354 (GO Enrichment Analysis (Filter)) created by blaz
Kontroli (slider-ja) v "Filter GO Term Nodes" v widgetu "GO Enrichment …

03/07/09:

16:43 Ticket #331 (License na webu) closed by janez
fixed
16:18 Ticket #338 (Detekcija operacijskega sistema na webu in ustrezen link za download) closed by janez
fixed

03/06/09:

18:17 Ticket #345 (Na webu lociti dokumentacijo za 1.0) closed by janez
fixed
18:17 Ticket #334 (Stran Documentation na webu) closed by janez
fixed
18:09 Changeset in orange [5813:583c8f55a267] by janezd <janez.demsar@…>
default
18:06 Changeset in orange [5812:f98a0ee7ffac] by janezd <janez.demsar@…>
default
13:04 Changeset in orange [5811:e488fa2b212d] by janezd <janez.demsar@…>
default
13:01 Changeset in orange [5810:78e889600ae9] by janezd <janez.demsar@…>
default
12:51 Changeset in orange [5809:f6072e9fe368] by janezd <janez.demsar@…>
default

03/05/09:

18:08 Changeset in orange-bioinformatics [699:e43b2f647c67] by markotoplak
defaultobiGeneMatch: documented the code obiAssess, obiGsea: code cleanups, minor …
16:07 Changeset in orange [5808:97468e183a7b] by janezd <janez.demsar@…>
default
16:05 Changeset in orange [5807:97e678dbe806] by janezd <janez.demsar@…>
default
15:40 Ticket #344 (Lepsi gumb za download na webu) closed by anonymous
fixed
11:23 Ticket #353 (obiGO in sgd GO) closed by anonymous
fixed
11:22 Changeset in orange-bioinformatics [698:bc969339db99] by ales_erjavec <ales.erjavec@…>
default- keggToGO returns original name on failure instead of None
09:20 Ticket #353 (obiGO in sgd GO) created by blaz
medtem ko spodnje dela: […] vrne […] napako (kar je cudno, …

03/04/09:

18:43 Changeset in orange-bioinformatics [697:91d38caa3324] by blaz <blaz.zupan@…>
defaultGetEnrichedTerms now also translates a set of reference genes

03/03/09:

15:09 Ticket #349 (ContDisribution in negativna varianca) closed by janez
fixed: rounding error.
15:09 Changeset in orange [5806:4be6d1852a56] by janezd <janez.demsar@…>
default- var and dev now return max(0, var) and max(0, dev)

03/02/09:

18:31 Ticket #352 (Select attributes: pri razredu ne dela puscica levo) created by janez
Razred ukines tako, da potegnes atribut na levo
18:30 Ticket #351 (Parallel coordinates se usuje, ce mu das risat spline) created by janez
18:30 Ticket #350 (MDS nima legende) created by janez
17:12 Changeset in orange [5805:5b24792cc6fd] by blaz <blaz.zupan@…>
defaultrenamed scofre_distance_to_centroids (before score_distanceToCentroids)
17:11 Changeset in orange [5804:5caba926ea3e] by blaz <blaz.zupan@…>
defaultrenamed scofre_distance_to_centroids (before score_distanceToCentroids)
16:19 Changeset in orange-bioinformatics [696:3e20f51199cd] by blaz <blaz.zupan@…>
defaultcall to hierarchical clustering changed
15:25 Changeset in orange [5803:2136af4398e7] by blaz <blaz.zupan@…>
defaultcolored dendrogram added
15:25 Changeset in orange [5802:a7fb1a29d684] by blaz <blaz.zupan@…>
defaulta sample script to accompany orngClustering documentation
15:24 Changeset in orange [5801:5257d8d5d48f] by blaz <blaz.zupan@…>
defaulta figure that goes with orngClustering documentation
15:11 Changeset in orange [5800:b55b98a5ff81] by blaz <blaz.zupan@…>
defaultminor corrections
14:59 Changeset in orange [5799:10a5f788dc88] by blaz <blaz.zupan@…>
defaultreduced size
14:43 Changeset in orange [5798:e93234e88685] by blaz <blaz.zupan@…>
defaultchange to B/W
14:40 Changeset in orange [5797:2e5c44717e17] by blaz <blaz.zupan@…>
defaultadded documentation on hierarchical clustering
14:39 Changeset in orange [5796:0069ec763e2c] by blaz <blaz.zupan@…>
defaultput out _test1 and _test2 (now in doc directory)
14:38 Changeset in orange [5795:96ba9b5312bd] by blaz <blaz.zupan@…>
defaultregression test scripts for orngClustering
11:40 Ticket #349 (ContDisribution in negativna varianca) created by ales
orange.ContDisribution vraca negativno varianco in nedefinirano deviacijo …

03/01/09:

22:28 Changeset in orange [5794:76843827f72c] by blaz <blaz.zupan@…>
defaulta figure that goes with orngClustering documentation
22:21 Changeset in orange [5793:27d06249c18d] by blaz <blaz.zupan@…>
defaultadded a reference to orngClustering
19:07 Changeset in orange [5792:caef9d9d4111] by blaz <blaz.zupan@…>
defaulta minor change in kmeans
18:31 Changeset in orange [5791:79878d0875a7] by blaz <blaz.zupan@…>
defaultnow the Learner correctly calls the init when data is given
18:30 Changeset in orange [5790:85848b9d9a6d] by blaz <blaz.zupan@…>
defaultcorrected the code for bayes.py
17:48 Changeset in orange [5789:9f9f06745c5b] by blaz <blaz.zupan@…>
default0.03% -> 3%
17:36 Changeset in orange [5788:a640f7600e24] by blaz <blaz.zupan@…>
defaultadd few more examples and figures
17:35 Changeset in orange [5787:c4a7d03eea26] by blaz <blaz.zupan@…>
defaulta figure that goes with orngClustering documentation
17:35 Changeset in orange [5786:6cc33b1875e3] by blaz <blaz.zupan@…>
defaulta sample script to accompany orngClustering documentation
16:48 Changeset in orange [5785:54b78237372d] by blaz <blaz.zupan@…>
defaultan example script that goes with orngClustering documentation

02/27/09:

14:03 Changeset in orange-bioinformatics [695:c756d8cd9f5e] by ales_erjavec <ales.erjavec@…>
default
13:56 Changeset in orange [5784:e3748da69741] by miha <miha.stajdohar@…>
default

02/23/09:

07:49 Changeset in orange [5783:233a3a641a05] by blaz <blaz.zupan@…>
defaultcorrected a typo
00:03 Changeset in orange [5782:ce1d9c986398] by blaz <blaz.zupan@…>
defaultdocumentation for orngClustering
00:02 Changeset in orange [5781:ce3328e9bca9] by blaz <blaz.zupan@…>
defaultan example script that goes with orngClustering documentation
00:02 Changeset in orange [5780:af4cc77b0730] by blaz <blaz.zupan@…>
defaultan example script that goes with orngClustering documentation

02/22/09:

23:22 Changeset in orange-bioinformatics [694:af5a122bcbb3] by ales_erjavec <ales.erjavec@…>
default
19:28 Changeset in orange [5779:9eccd8c9967a] by blaz <blaz.zupan@…>
defaultAdded k-means clustering (and associated functions), also added …
16:29 Changeset in orange [5778:4ab64effe500] by blaz <blaz.zupan@…>
defaultcorrected the path to the stylesheet

02/21/09:

12:31 Changeset in orange [5777:b0a8c28ab94d] by blaz <blaz.zupan@…>
defaultexampleTableClustering changed to hierarchicalClustering_examples, plus …
12:29 Changeset in orange-bioinformatics [693:8d1ddb410356] by blaz <blaz.zupan@…>
defaultexampleTableClustering changed to hierarchicalClustering_examples, plus …
12:23 Changeset in orange [5776:8726cf2aaaf8] by blaz <blaz.zupan@…>
defaultexampleTableClustering changed to hierarchicalClustering_Examples, plus …
12:23 Changeset in orange-bioinformatics [692:822026e7f17a] by blaz <blaz.zupan@…>
defaultexampleTableClustering changed to hierarchicalClustering_Examples

02/19/09:

14:34 Changeset in orange [5775:b92588d331a5] by ales_erjavec <ales.erjavec@…>
default- fixed Py_BuildValue call in TStressFunc_Python.operator
13:25 Changeset in orange-bioinformatics [691:0027786bf9eb] by tomazc <tomaz.curk@…>
default
13:24 Changeset in orange-bioinformatics [690:9d123f4f9360] by tomazc <tomaz.curk@…>
default
13:07 Changeset in orange-bioinformatics [689:6aa80c7bb628] by tomazc <tomaz.curk@…>
default
12:58 Changeset in orange-bioinformatics [688:a1caf9be3256] by tomazc <tomaz.curk@…>
defaultFDR and Bonferroni correction of p values
12:54 Changeset in orange-bioinformatics [687:d83024a2a7bd] by ales_erjavec <ales.erjavec@…>
default- added selected genes info label
12:51 Changeset in orange-bioinformatics [686:248b7aceed31] by ales_erjavec <ales.erjavec@…>
default
12:17 Changeset in orange [5774:5f1fef19888f] by ales_erjavec <ales.erjavec@…>
default- fixed date matching in update_local_files function
12:09 Changeset in orange-bioinformatics [685:a3dd57397297] by ales_erjavec <ales.erjavec@…>
default
11:43 Changeset in orange-bioinformatics [684:d566bd287e74] by markotoplak
defaultobiGsea: .
11:36 Changeset in orange-bioinformatics [683:ea7b6ece7afb] by markotoplak
defaultobiGsea: manual
11:33 Changeset in orange-bioinformatics [682:8ec768919fb3] by markotoplak
defaultobiGsea: manual update (directly using correlation data)

02/18/09:

14:43 Changeset in orange-bioinformatics [681:94b5f9ea60f4] by ales_erjavec <ales.erjavec@…>
default- added OWVulcanoPlot.py
13:24 Changeset in orange [5773:9f4e047b36d0] by miha <miha.stajdohar@…>
defaultimproved rotate
13:24 Changeset in orange [5772:11f80cc6ce30] by miha <miha.stajdohar@…>
default
13:23 Changeset in orange [5771:589f7f6111ed] by miha <miha.stajdohar@…>
default
12:16 Changeset in orange-bioinformatics [680:907440adb96b] by markotoplak
defaultobiGsea: more tolerant input of precomputed scores obiDicty: removed …
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