Timeline


and

05/26/09:

15:45 Ticket #450 (Tooltip na scatterplotu/linear projection izgine) created by janez
Ko premakneš miš ... ali pa včasih celo takoj, še preden jo premakneš.
14:20 Changeset in orange [6060:5a9d34772830] by markotoplak
defaultorngStat: fixes in cd_graph
13:41 Changeset in orange [6059:7516337bf84f] by markotoplak
defaultorngStat: added comparison single to others.

05/25/09:

15:53 Changeset in orange-bioinformatics [887:86a2daeb2073] by ales_erjavec <ales.erjavec@…>
default- added useCannonicalFragments argument to Fragmenter.call
15:32 Changeset in orange-bioinformatics [886:10b6d4aa0d42] by ales_erjavec <ales.erjavec@…>
default- fixed a bug with unknown smiles attributes in Fragmenter
14:22 Changeset in orange-bioinformatics [885:627783a4a420] by ales_erjavec <ales.erjavec@…>
default
13:03 Changeset in orange-bioinformatics [884:ba14a6eba4b0] by ales_erjavec <ales.erjavec@…>
default- misspelled additionalAliases - removed commented and unaccessible code
12:59 Changeset in orange-bioinformatics [883:1efd15530f5f] by ales_erjavec <ales.erjavec@…>
default
12:36 Changeset in orange [6058:8ca0079f39fa] by miha <miha.stajdohar@…>
default
12:36 Changeset in orange [6057:536dfedc2ff9] by miha <miha.stajdohar@…>
default
12:27 Changeset in orange-bioinformatics [882:4846d9cc6ac2] by ales_erjavec <ales.erjavec@…>
default
11:56 Changeset in orange-bioinformatics [881:05ca1899df0d] by ales_erjavec <ales.erjavec@…>
default- changed fragment variables from FloatVariable to EnumVariable
11:53 Ticket #449 (aditionalAliases misspelled) created by blaz
In GO, AnnotationRecord has a misspelled attribute called …
10:47 Changeset in orange-bioinformatics [880:c9a023b32977] by ales_erjavec <ales.erjavec@…>
default

05/24/09:

18:18 Changeset in orange [6056:a1abdd1ee1f7] by Mitar <Mitar@…>
defaultSet zero exit value for some scripts.
13:39 Changeset in orange [6055:51750d5ac9e2] by Mitar <Mitar@…>
defaultAdded additional error reporting to scripts.
13:39 Changeset in orange [6054:05e3129cd5f3] by Mitar <Mitar@…>
defaultAdded additional error reporting to scripts.

05/22/09:

15:20 Ticket #448 (obiGene.NCBIGeneInfo("hsa") vrze exception) reopened by blaz
ales, ta funkcija sedaj dela narobe. primer (za mmu vrne samo 2807 genov, …
13:17 Changeset in orange-bioinformatics [879:ac1dfc4bff67] by markotoplak
defaultobiGene: documentation example added.
13:17 Changeset in orange-bioinformatics [878:730380063a85] by markotoplak
defaultgene match manual, minor changes to obiGsea and obiDicty

05/21/09:

18:29 Changeset in orange-bioinformatics [877:6f5daee3f44b] by markotoplak
defaultobiGene documentain, cont.
18:02 Changeset in orange-bioinformatics [876:0c760a630053] by markotoplak
defaultobiGene: started writing the manual.
16:57 Changeset in orange-bioinformatics [875:5aabaad4a8c5] by markotoplak
defaultdocumentation: new geneMatch example
15:32 Changeset in orange [6053:cc653e69428c] by miha <miha.stajdohar@…>
default
15:31 Changeset in orange [6052:82184692fed1] by miha <miha.stajdohar@…>
default
10:48 Changeset in orange [6051:1a0740e922ef] by Mitar <Mitar@…>
defaultUpdated screenrc so that it does not clobber the PATH.
10:28 Changeset in orange [6050:55186730a4dc] by gregor <gregor@…>
default- added fisher discriminant analysis - changed api
09:53 Changeset in orange [6049:51c22c4d30b2] by Mitar <Mitar@…>
defaultHid some VMware host Mac OS X warnings.
09:52 Changeset in orange [6048:fc8fb6cf2c41] by Mitar <Mitar@…>
defaultBugfixing VMware scripts.
09:49 Changeset in orange-bioinformatics [874:3416f771eba4] by markotoplak
defaultobiAssess: added test printout
08:21 Changeset in orange [6047:cc9197725ba0] by miha <miha.stajdohar@…>
default
03:05 Changeset in orange [6046:e43441d679ec] by Mitar <Mitar@…>
defaultBugfixing VMware scripts.

05/20/09:

21:23 Changeset in orange-bioinformatics [873:e9a84e1e1f68] by crt <crtomir.gorup@…>
defaultPart of new example.
21:23 Changeset in orange-bioinformatics [872:7ceed218d799] by crt <crtomir.gorup@…>
defaultExample of MeSH term enrichment calculation.
13:58 Ticket #438 (Gene Selected crashes on a simple data set) closed by ales
fixed
13:53 Changeset in orange-bioinformatics [871:d64a1a529744] by ales_erjavec <ales.erjavec@…>
default
13:12 Ticket #448 (obiGene.NCBIGeneInfo("hsa") vrze exception) closed by ales
fixed
13:03 Changeset in orange-bioinformatics [870:e8f613e75dfd] by ales_erjavec <ales.erjavec@…>
default- fixed name matching
12:33 Changeset in orange [6045:234bcdf3000d] by miha <miha.stajdohar@…>
default
09:10 Ticket #448 (obiGene.NCBIGeneInfo("hsa") vrze exception) created by blaz
Klic: […] vrze exception: […] ceprav ne bi smel, saj spodnje dela …
07:52 Changeset in orange-bioinformatics [869:d488ee5ecdc6] by markotoplak
defaultobiDicty: removed printout

05/19/09:

20:37 Changeset in orange [6044:ba29415a484b] by tomazc <tomaz.curk@…>
default
20:20 Changeset in orange [6043:3b6f01466502] by Mitar <Mitar@…>
defaultAdded daily building output log saving on Mac OS X.
14:57 Changeset in orange [6042:ec347876b030] by Mitar <Mitar@…>
defaultAdded vmware-status script.
14:55 Changeset in orange [6041:0af7c83f551f] by Mitar <Mitar@…>
defaultUpdated VMware scripts.
14:46 Changeset in orange [6040:6cea69e26d69] by Mitar <Mitar@…>
defaultMoved VMware scripts to a dedicated directory.
14:01 Changeset in orange-bioinformatics [868:ba853fa6b48e] by markotoplak
defaultremoved obiGeneMatch from setup.py
13:56 Ticket #447 (linear learner umre na priloženem datasetu) created by marko
Prilagam dataset in testno kodo. Na istem datasetu brez težav delujejo …
13:18 Changeset in orange-bioinformatics [867:2161f254c4c4] by markotoplak
defaultRemoved obiGeneMatch from the repository.
13:03 Changeset in orange-bioinformatics [866:19e5855e85c2] by markotoplak
defaultRemoved all usages of obiGeneMatch in scripts.
12:39 Changeset in orange-bioinformatics [865:23402c0e461e] by ales_erjavec <ales.erjavec@…>
default- moved annotations combo box population outside of the init method
12:36 Changeset in orange [6039:ee740726bd35] by ales_erjavec <ales.erjavec@…>
default
12:31 Changeset in orange [6038:a84add35e203] by Mitar <Mitar@…>
defaultFixed hiding of some VMware host Mac OS X warnings.
12:12 Changeset in orange [6037:092c72e269e5] by miha <miha.stajdohar@…>
default
12:07 Changeset in orange-bioinformatics [864:a82fdaa0285b] by markotoplak
defaultobiGsea: use obiGene for gene matching.
09:45 Changeset in orange-bioinformatics [863:f2f4e84027bc] by blaz <blaz.zupan@…>
defaultminor changes and corrections
09:30 Changeset in orange-bioinformatics [862:ba5856176975] by blaz <blaz.zupan@…>
defaultadded one more space to tax field

05/18/09:

22:00 Ticket #446 (Report v Association Rules Viewer ne da urejenih pravil) created by janez
Če pravila urediš po, recimo, zaupanju, jih Save Rules izpiše urejene po …
15:00 Changeset in orange-bioinformatics [861:4444600905df] by ales_erjavec <ales.erjavec@…>
default- changed Shared term genes output option to Common term genes.
14:50 Ticket #424 (GO output options: inclusive/disjoint) closed by ales
fixed
14:45 Changeset in orange-bioinformatics [860:3a147a7d6a0a] by ales_erjavec <ales.erjavec@…>
default- added Shared term genes output option to GOEnrichemntAnalysis widget. - …
12:25 Ticket #443 (ni progress bara ob prvem nalaganju podatkov v KEGG-u (in ostalih ...) closed by ales
fixed
12:25 Changeset in orange-bioinformatics [859:c847e5ddf7ca] by ales_erjavec <ales.erjavec@…>
default- using orngServerFiles.DownloadProgress.setredirect to redirect output to …
12:18 Changeset in orange-bioinformatics [858:15f688f1e4c2] by ales_erjavec <ales.erjavec@…>
default- using orngServerFiles.DownloadProgress.setredirect to redirect output to …
11:58 Changeset in orange-bioinformatics [857:1147bad7b8a5] by ales_erjavec <ales.erjavec@…>
default- using orngServerFiles.DownloadProgress.setredirect to redirect output to …
11:56 Changeset in orange [6036:a59885e45999] by ales_erjavec <ales.erjavec@…>
default- added setredirect and contexts enter, exit methods to DownloadProgress …
08:16 Changeset in orange-bioinformatics [856:3506fc5669e1] by crt <crtomir.gorup@…>
defaultNew comments, code cleanup, proper orngServerFiles handling.
08:14 Changeset in orange-bioinformatics [855:e2f55979959d] by crt <crtomir.gorup@…>
defaultProgress bar bug was solved, dataset length check was added, comments …
07:30 Changeset in orange [6035:39512ab9d14e] by tomazc <tomaz.curk@…>
default
07:12 Changeset in orange [6034:5092e478cc33] by tomazc <tomaz.curk@…>
default

05/15/09:

15:18 Changeset in orange [6033:2882dfcfdcca] by blaz <blaz.zupan@…>
defaultfinds add-ons directories that can now (also) be in the same directory as …
00:18 Ticket #445 (Izbira direktorija za reporte) created by janez
Uporabnik naj ima moznost izbrati/spremeniti direktorij z reporti
00:09 Changeset in orange [6032:8a6bccee5a2b] by janezd <janez.demsar@…>
default- change the reports directory on Mac

05/14/09:

15:19 Ticket #415 (KEGG widget -> Ontology/Annotation Info (Mac OS X)) closed by ales
fixed
15:18 Ticket #403 (GO Enrichment Analysis -> Report) closed by ales
fixed
15:18 Changeset in orange-bioinformatics [854:cfd3ed6322c8] by ales_erjavec <ales.erjavec@…>
default- changed sendReport function - changed modality of show ontology and …
10:41 Changeset in orange [6031:b1e9136eb85a] by gregor <gregor@…>
default

05/13/09:

17:06 Changeset in orange [6030:49625fda1798] by miha <miha.stajdohar@…>
default
17:06 Changeset in orange [6029:d31f2c6c271f] by miha <miha.stajdohar@…>
defaultadded connect graph by knn
17:05 Changeset in orange [6028:f8c87c5efdc6] by miha <miha.stajdohar@…>
defaultadded return k nearest neighbours
13:26 Ticket #419 (prazen hierarhical clustering vrze exception) closed by ales
fixed
13:25 Changeset in orange [6027:1df3e3ffaaa4] by ales_erjavec <ales.erjavec@…>
default
12:30 Ticket #377 (na Mac OS X clustering v HeatMap widgetu ne dela) closed by ales
fixed
12:28 Changeset in orange-bioinformatics [853:e3db108887b2] by ales_erjavec <ales.erjavec@…>
default
12:17 Changeset in orange-bioinformatics [852:7d747988dc21] by markotoplak
defaultobiAssess: fixed mean, median
11:46 Ticket #444 (Koncnica v Save Image) created by ales
avtomaticno spremeni koncnico v save image dialogu ob spremembi vrste …
09:49 Changeset in orange [6026:b7adf4ad43f2] by gregor <gregor@…>
default- the ability to show a subset of attributes based on the name
09:48 Changeset in orange [6025:de321206a83d] by gregor <gregor@…>
default- bug fix regarding ignoreCase

05/11/09:

10:19 Changeset in orange [6024:d91e7b10c5c9] by Mitar <Mitar@…>
defaultHid some VMware host Mac OS X warnings, really.

05/10/09:

23:46 Changeset in orange [6023:c2cb0e9224f5] by Mitar <Mitar@…>
defaultHid some VMware host Mac OS X warnings.

05/08/09:

14:51 Ticket #421 (sorting in GO widget) closed by ales
fixed
14:51 Ticket #422 (GO widget - cluster and reference columns) closed by ales
fixed
14:50 Changeset in orange-bioinformatics [851:13480913bc3a] by ales_erjavec <ales.erjavec@…>
default- added percentage of total to cluster and reference columns - fixed item …
13:05 Ticket #442 (GO ima probleme z nekaterimi organizmi) closed by ales
fixed
13:04 Ticket #413 (Feature selection (bioinformatics) - Score Method) closed by ales
fixed
13:04 Ticket #423 (GO selection of terms) closed by ales
fixed
12:48 Ticket #396 (gene selection widget previsok) closed by ales
fixed
12:47 Ticket #401 (gene info naj prikaže tudi ime gena v datasetu) closed by ales
fixed
12:47 Changeset in orange-bioinformatics [850:f46a92ff794d] by ales_erjavec <ales.erjavec@…>
default- added original name in dataset to symbol column
09:48 Ticket #443 (ni progress bara ob prvem nalaganju podatkov v KEGG-u (in ostalih ...) created by tomaz
Canvas zmrzne, ko se prvic nalagajo podatki (iz streznika orngServerFiles) …
09:38 Ticket #410 (KEGG widget na Mac OS X Boundle pade (PIL ni vkljucen v distribucijo)) closed by anonymous
fixed: Narejeno. Stestirano v bundlu.

05/07/09:

14:39 Changeset in orange [6022:3ae576361939] by ales_erjavec <ales.erjavec@…>
default
13:40 Ticket #442 (GO ima probleme z nekaterimi organizmi) created by blaz
Pocistil sem vse v bigfiles d:\application Data\orange\buffer\bigfiles\GO, …
11:41 Changeset in orange-bioinformatics [849:f1c8d433b039] by ales_erjavec <ales.erjavec@…>
default- do not return samples with missing classes if missing_class_value …
10:46 Ticket #441 (GEO Datasets- missing values) created by Minca
- GEO Datasets widget ne dela pravilno, ce izbiras primere iz dolocenih …

05/06/09:

11:16 Ticket #440 (Databases widget in vec niti) created by ales
Omeji stevilo niti v Databases update widgetu.
09:47 Ticket #439 (Gene Selection in string atributi) created by blaz
Gene Selection naj v izhodno tabelo vkljuci tudi vse ostale atribute, ki …
09:34 Ticket #438 (Gene Selected crashes on a simple data set) created by blaz
Data set is attached. Gene Selection crashes with: […]
09:17 Changeset in orange-bioinformatics [848:46fad2b28f2e] by markotoplak
defaultobiAssess: added calculation of mean aand median among genes in the gene …

05/05/09:

14:26 Ticket #437 (napaka v izpisu Bayesovega klasifikatorja) created by lan
V modulu orngBayes se v funkciji printModel zatakne pri izpisovanju …
14:11 Ticket #432 (SOM) closed by ales
fixed
14:11 Changeset in orange [6021:bbc37d1b67cb] by ales_erjavec <ales.erjavec@…>
default- fixed trac ticket #432 < http://www.ailab.si/orange/trac/ticket/432>
14:08 Changeset in orange [6020:3e1cfaa5ec1d] by ales_erjavec <ales.erjavec@…>
default- properly set map_shape in SOMLearner
12:43 Ticket #435 (GEO DataSets - show number of data sets after filtering) closed by ales
fixed
12:42 Changeset in orange-bioinformatics [847:17a56d92e785] by ales_erjavec <ales.erjavec@…>
default- added info about the number of filtered datasets
12:20 Ticket #436 (Data table - improvements) created by ales
* can we change order of columns in the data table widget * can we order …
11:58 Changeset in orange-bioinformatics [846:77ade118e54b] by crt <crtomir.gorup@…>
defaulttest
11:55 Changeset in orange-bioinformatics [845:3c7e054f9430] by ales_erjavec <ales.erjavec@…>
default- bug fix (used None for referenceGenes)
10:24 Changeset in orange-bioinformatics [844:668feceaa662] by markotoplak
defaultobiAssess: score pathways with Ideker et al. procedure

05/04/09:

18:45 Ticket #434 (GEO DataSets - show number of data sets after filtering) closed by blaz
invalid
18:45 Ticket #435 (GEO DataSets - show number of data sets after filtering) created by blaz
Ali lahko pri tem widgetu v info box dodas se "XX after filtering" (tretja …
18:45 Ticket #434 (GEO DataSets - show number of data sets after filtering) created by blaz
Ali lahko pri tem widgetu v info box dodas se "XX after filtering" (tretja …
15:52 Changeset in orange-bioinformatics [843:99ae80eb6940] by ales_erjavec <ales.erjavec@…>
default- changed selection mode to Extended - more clear options in output box
15:32 Ticket #433 (matching v Gene Info ne dela) closed by blaz
fixed: Imas prav, ampak nisem upsel najti razloga, zakaj je meni kazal samo 3. …
14:35 Changeset in orange [6019:3caac45bd201] by ales_erjavec <ales.erjavec@…>
default- calling SearchUpdate after sorting (used to show all items after sort)
14:29 Ticket #411 (GEO ne izpisuje informacij o data setu) closed by ales
fixed
14:27 Changeset in orange-bioinformatics [842:5ef20d703cc8] by ales_erjavec <ales.erjavec@…>
default-fixed trac ticket #411 (showed all items on sort, but did not call …

05/02/09:

20:21 Ticket #433 (matching v Gene Info ne dela) created by blaz
V pripeti datoteki je 60 genov, od tega jih Gene Info prikaze samo 3 (3 …

05/01/09:

11:03 Ticket #432 (SOM) created by blaz
Nastavitve Columns in Rows ne vplivajo na topologijo (File -> SOM -> …

04/30/09:

14:43 Changeset in orange [6018:0cd9a2f95631] by ales_erjavec <ales.erjavec@…>
default- moved all matplotlib.pyplot imports inside finctions, classes that need …
12:52 Changeset in orange [6017:6e7374c9482d] by markotoplak
defaultorngRegression: extend classifier when needed
12:05 Changeset in orange [6016:5aef253410fe] by Mitar <Mitar@…>
defaultIncreased VMware image boot wait time so that it should work also on more …
09:46 Ticket #431 (Orange Canvas: Icon Size preklopi tab) created by blaz
Sprememba "Icon Size" v Orange Canvas preklopi tab (odprto imam Tabs with …

04/29/09:

15:44 Ticket #425 (ozivljanje ekspression profiles) closed by ales
fixed
15:43 Changeset in orange-bioinformatics [841:b66f579cfa51] by ales_erjavec <ales.erjavec@…>
default- added context handlers - added sendReport method
14:25 Ticket #430 (ugibanje tipa atributov iz .txt datotek) created by blaz
V pripeti datoteki Orange (napacno) ugane, da sta prva dva atributa …
14:05 Changeset in orange [6015:a0f60f83bdbe] by blaz <blaz.zupan@…>
defaultchanged path to local Orange help and online orange help (both now go to …
13:51 Ticket #429 (Tipka DEL ne dela prav v Orange Canvasu na Mac OS X) created by blaz
Ce namrec izberem en sam widget, ga tipka DEL brise, ce pa izberem vec …
13:36 Changeset in orange-bioinformatics [840:9ab73038bb06] by ales_erjavec <ales.erjavec@…>
default- now works on classless domains - added info box
12:03 Ticket #427 (Gene Info widget is slow) closed by ales
fixed
12:02 Ticket #428 (Gene Info - Commit) closed by ales
fixed
12:01 Changeset in orange-bioinformatics [839:60c0925f00c4] by ales_erjavec <ales.erjavec@…>
default- avoiding gene info reloading for the same organism - better item …
09:11 Ticket #428 (Gene Info - Commit) created by blaz
Odprem Gene Info, izkljucim Commit on change, dam v ta widget …

04/28/09:

22:48 Ticket #427 (Gene Info widget is slow) created by blaz
Gadi writes: I have been playing with Orange and enjoying it a lot. One …
17:11 Changeset in orange [6014:b8f39d205cc6] by gregor <gregor@…>
default- renamed lineEditHint
17:11 Changeset in orange [6013:53b7d1121237] by gregor <gregor@…>
default- bug fix
16:32 Changeset in orange [6012:7cf09f39d4d0] by gregor <gregor@…>
default
16:28 Changeset in orange [6011:c52926861585] by gregor <gregor@…>
default
16:25 Changeset in orange [6010:c3bfef923b86] by gregor <gregor@…>
default
16:25 Changeset in orange [6009:2c6e0bd36fa1] by gregor <gregor@…>
default
16:16 Changeset in orange [6008:d8bd701b4a3e] by gregor <gregor@…>
default
16:05 Changeset in orange-bioinformatics [838:f522a53ce462] by markotoplak
defaultDicty scipty, widget: optional exclusion of consant labels. chips are now …
12:59 Ticket #426 (Data Profiles) created by blaz
Tole je se wish list za Data Profiles: super bi bilo, ce bi lahko zbirali …
12:57 Ticket #425 (ozivljanje ekspression profiles) created by blaz
Widget Expression Profiles v sklopu bioinformaticnih widgetov je treba …
12:30 Ticket #424 (GO output options: inclusive/disjoint) created by tomaz
Ales, prosim popravi in preveri to funkcionalnost GO widgeta: GO …
11:57 Changeset in orange [6007:23d0c9e50dcb] by gregor <gregor@…>
default- bug fix: fixed the vertical size of the LineEditHint - FilterLineEdit …
Note: See TracTimeline for information about the timeline view.