Timeline


and

04/30/13:

18:46 Ticket #1299 (Databases Update should be able to cancel the update) closed by ales
fixed: Added a Cancel button to the widget in b82955e67844.
17:51 Changeset in orange-bioinformatics [1771:bf833fa5d2a3] by Ales Erjavec <ales.erjavec@…>
defaultFixed 'Ontology' and 'Annotations' stream parsing.
15:30 Changeset in orange-bioinformatics [1770:48af55b8e628] by Ales Erjavec <ales.erjavec@…>
default'Ontology.getitem' now raises a KeyError for an unknown term id.
14:29 Changeset in orange-bioinformatics [1769:c0c6b64879cf] by Ales Erjavec <ales.erjavec@…>
defaultFilter out terms from the annotations that are not present in the …
13:22 Changeset in orange-bioinformatics [1768:9cb38945684f] by Ales Erjavec <ales.erjavec@…>
defaultRemoved deprecated and nonfunctioning 'drawEnrichmentGraph_tostream' …
12:47 Changeset in orange-bioinformatics [1767:214b1db4e31a] by Ales Erjavec <ales.erjavec@…>
defaultobiGO code style fixes.
10:57 Changeset in orange [11484:180ff4d9e42e] by Ales Erjavec <ales.erjavec@…>
defaultA major rewrite of the 'Databases Update' widget. Now has better …
10:56 Changeset in orange [11483:b82955e67844] by Ales Erjavec <ales.erjavec@…>
defaultUse new OWConcurrent classes, added a 'Cancel' button.
10:56 Changeset in orange [11482:30188643fe5b] by Ales Erjavec <ales.erjavec@…>
defaultAdded 'progressEventsFlags' argument to 'progressBarSet' method.
10:52 Changeset in orange [11481:08b42fee6cf6] by Ales Erjavec <ales.erjavec@…>
defaultExtended the OWConcurrent module with 'concurrent.futures' like interface. …

04/29/13:

18:58 Changeset in orange [11480:c0961e845ab4] by Ales Erjavec <ales.erjavec@…>
defaultAdded Orange/datasets directory to MANIFEST.in

04/26/13:

11:50 Changeset in orange-bioinformatics [1766:7508cfe5ad26] by Flashpoint <vid.flashpoint@…>
defaultAdded obiDictyMutants.py
11:49 Changeset in orange-bioinformatics [1765:b497b961c944] by Flashpoint <vid.flashpoint@…>
defaultAdded obiDictyMutants.py
11:38 Changeset in orange-bioinformatics [1764:04eaaffe6804] by Flashpoint <vid.flashpoint@…>
defaultMerged biolab/orange-bioinformatics into default
09:51 Changeset in orange-bioinformatics [1763:896de921cd4b] by Flashpoint <vid.flashpoint@…>
defaultFixed several syntax errors
09:04 Changeset in orange-bioinformatics [1762:12c8aae24310] by Flashpoint <vid.flashpoint@…>
defaultDeleted unused imports
08:53 Changeset in orange-bioinformatics [1761:d8f3d4bb64fa] by Flashpoint <vid.flashpoint@…>
defaultAdded obiDictyMutants.py

04/25/13:

18:44 Ticket #1303 (network add-on not shown after installation) created by marko
If I install the network add-on through the canvas dialog, the new …
14:51 Changeset in orange [11479:69e2cdaf858a] by markotoplak
defaultAdd-on update interface available from the new canvas.
13:16 Ticket #1302 (Redirection in OMIM disease links) created by vid
The omimGeneSets() function in obiGeneSets.py uses links to a site, that …

04/24/13:

14:51 Ticket #1301 (Broken links) closed by miha
fixed
13:24 Changeset in orange [11478:ae98e16d5a25] by Miha Stajdohar <miha.stajdohar@…>
defaultMerge.
13:19 Changeset in orange [11476:08516677bd02] by markotoplak
defaultThe toolbox shows only one expanded category at the time by default.
13:12 Changeset in orange [11475:571d3f011542] by markotoplak
defaultAdded icons for Visualize Qt.
13:11 Changeset in orange [11477:c1fdcc4deb7b] by Miha Stajdohar <miha.stajdohar@…>
defaultRemoved broken links.
13:11 Changeset in orange [11474:df0622184ee6] by markotoplak
defaultRenamed Visualize Qt to VisualizeQt (so it can be loaded in new canvas).
13:10 Changeset in orange [11473:2abb476eaf6a] by markotoplak
defaultOWDatabaseUpdate: changed some strings.

04/23/13:

23:06 Ticket #1301 (Broken links) created by janez
E-mail from Scott Carl: I think this link is broken: …
17:56 Changeset in orange [11472:744aa9836ba0] by Ales Erjavec <ales.erjavec@…>
defaultMerge
17:35 Changeset in orange [11471:20cbd9d2b23b] by Ales Erjavec <ales.erjavec@…>
defaultFix an TypeError when clearing the CanvasScene instance.
17:24 Changeset in orange [11470:164497e2fd9a] by Ales Erjavec <ales.erjavec@…>
defaultCheck if widget is still a part of the scheme.
17:24 Changeset in orange [11469:35ca66b6b2d0] by Ales Erjavec <ales.erjavec@…>
defaultUse pause/resume interface of base SignalManager.
17:21 Changeset in orange [11468:dce8ec51efa1] by Ales Erjavec <ales.erjavec@…>
defaultSet the parent for Scheme instances, stop the the signal manager when …
14:09 Changeset in orange-bioinformatics [1760:165df4199ec9] by Ales Erjavec <ales.erjavec@…>
defaultOptimized DBDatabase batch_get/pre_cache w.r.t. number of separate network …
14:07 Ticket #1300 (Double downloads in obiOMIM.py) created by vid
the morbidmap file is downloaded twice in obiOMIM.py (once in the …
13:21 Changeset in orange-bioinformatics [1759:28ae945028d1] by markotoplak
defaultDeleted an obsolete update script.
13:09 Changeset in orange-bioinformatics [1758:338084e4c84e] by markotoplak
defaultRemoved KEGG as the current KEGG script does not uses serverfiles.

04/22/13:

16:48 Changeset in orange [11467:6b291596554f] by Ales Erjavec <ales.erjavec@…>
defaultUpdate only a single pending node in the 'UpdateRequest' event. Schedule …
16:07 Changeset in orange [11466:8a76128400a7] by Ales Erjavec <ales.erjavec@…>
defaultFix handling of 'blocking' nodes.
16:07 Changeset in orange [11465:5c3834e1d2ea] by Ales Erjavec <ales.erjavec@…>
defaultDelay the deletion of the Scheme and/or OWBaseWidget until SignalManager …
14:53 Changeset in orange [11464:7b8484a00739] by Ales Erjavec <ales.erjavec@…>
defaultFixed CanvasScene clear/reset. Disconnect all …

04/19/13:

20:15 Changeset in orange-bioinformatics [1757:1aee9d34655b] by Ales Erjavec <ales.erjavec@…>
defaultDisabled automatic cache invalidation.
16:40 Changeset in orange-bioinformatics [1756:ec01f8aa98a9] by markotoplak
defaultSTRING database build: do not unzip files.
13:39 Changeset in orange [11463:c91eabaff9fe] by Ales Erjavec <ales.erjavec@…>
defaultUsing 'LayoutRequest' event to schedule an anchor layout. This prevents …
11:12 Changeset in orange [11461:a7acfd5945f6] by Ales Erjavec <ales.erjavec@…>
defaultFixed handling of blocking widget states in orngSignalManager.

04/18/13:

22:56 Changeset in orange-bioinformatics [1755:418d0e7f330a] by markotoplak
defaultMerge.
22:45 Changeset in orange-bioinformatics [1754:56ba93b2b1e1] by markotoplak
defaultUpdate scripts: warn if username and password are not passed.
22:43 Changeset in orange-bioinformatics [1753:d8bea5b19e25] by markotoplak
defaultUpdate script for STRING: reads current version from the webpage and …
22:42 Changeset in orange-bioinformatics [1752:9932018b0728] by markotoplak
defaultUpdate script for gene sets.
20:08 Changeset in orange-bioinformatics [1751:a3db39d180ab] by Ales Erjavec <ales.erjavec@…>
defaultFixed KEGG Pathway Browser organism list initialization.
20:04 Changeset in orange [11460:7dfaa3b56f43] by Ales Erjavec <ales.erjavec@…>
defaultAdded 'slumber' and 'requests' packages to the OSX bundle build scripts.
19:11 Changeset in orange-bioinformatics [1750:8a7cd2cf4ea2] by Ales Erjavec <ales.erjavec@…>
defaultUsing a single global Genome instance in obiKEGG module level functions.
18:54 Changeset in orange-bioinformatics [1749:29a979e9bf4d] by Ales Erjavec <ales.erjavec@…>
defaultOptimized Gsea widget organism list initialization.
14:09 Changeset in orange-bioinformatics [1748:3a6c3d41aaee] by Ales Erjavec <ales.erjavec@…>
defaultTest for the presence of 'self.signalManager'. A default global …
12:09 Changeset in orange-bioinformatics [1747:fee3c71716ef] by markotoplak
defaultKEGG organism name finding fixes.

04/17/13:

18:30 Changeset in orange [11459:fc07a5c346be] by Ales Erjavec <ales.erjavec@…>
defaultFixed checks for passed dataset table argument in new methods. Use …
11:48 Ticket #1294 (UnicodeDecodeError when loading/saving widget settings) closed by Ales Erjavec <ales.erjavec@…>
fixed: In [2c6a670c84c3f22bebb09bc9a963891bf0e1653a/orange]: […]
11:46 Changeset in orange [11458:2c6a670c84c3] by Ales Erjavec <ales.erjavec@…>
defaultFixed saving/loading of widget settings when the directory path contains …

04/16/13:

18:47 Changeset in orange [11457:a89187176fc8] by Ales Erjavec <ales.erjavec@…>
defaultAdded a workaround/fix for different PIL import conventions.
12:34 Changeset in orange [11456:96f4e75250e1] by Ales Erjavec <ales.erjavec@…>
defaultChanged the '_path_fix' function to preserve the order of non miktex …

04/15/13:

15:22 Ticket #1299 (Databases Update should be able to cancel the update) created by ales
while the update/download is in progress. It should also stop/cancel when …
12:15 Changeset in orange [11455:ea4f1b23ca68] by Ales Erjavec <ales.erjavec@…>
defaultPreserve meta attributes in 'Basis matrix' output.
12:15 Changeset in orange [11454:7121b9a53a58] by Ales Erjavec <ales.erjavec@…>
defaultPreserve meta attributes in the 'Transformed Data' output.

04/14/13:

14:14 Ticket #1298 (Middle mouse button for scrolling canvas) created by ubershmekel
The middle mouse button is used in many programs for scrolling the canvas. …
00:17 Ticket #1297 (Crash while loading C4.5 data) created by ddr
Orange crashes while I attempt to load C4.5 data. It's deterministic. …

04/12/13:

13:55 Changeset in orange-bioinformatics [1746:54b84bf6d1a4] by Ales Erjavec <ales.erjavec@…>
defaultDeleted old and obsolete obiKEGG.py module
13:39 Changeset in orange-bioinformatics [1745:8b2d53ec3523] by Ales Erjavec <ales.erjavec@…>
defaultFixed 'organism_name_search' method.
13:14 Changeset in orange-bioinformatics [1744:fad34df9e962] by Ales Erjavec <ales.erjavec@…>
defaultMoved old obiKEGG tests inside the obiKEGG package.
12:35 Changeset in orange-bioinformatics [1743:9f18a1e0657c] by Ales Erjavec <ales.erjavec@…>
defaultExtended term name mangling to all python reserved keywords.
12:24 Changeset in orange-bioinformatics [1742:fa3a9e4af7e6] by Ales Erjavec <ales.erjavec@…>
defaultCode style and docstring fixes.

04/11/13:

18:14 Changeset in orange [11462:fbd2b8d69e16] by Ales Erjavec <ales.erjavec@…>
defaultOverride the 'Quit' keyboard shortcut when a popup window is shown.

04/10/13:

11:36 Changeset in orange [11453:dcd1485536ca] by Ales Erjavec <ales.erjavec@…>
defaultMerge
11:28 Changeset in orange [11452:ce769ae3b71e] by Ales Erjavec <ales.erjavec@…>
defaultFixed LineEdit's initial size/layout.
10:25 Changeset in orange-bioinformatics [1741:1c2feb7cd8d2] by Ales Erjavec <ales.erjavec@…>
defaultAdded 'prefix' parameter for KEGG Pathway database interface.

04/09/13:

13:22 Changeset in orange-bioinformatics [1740:0ef1058694a2] by Ales Erjavec <ales.erjavec@…>
defaultTry guessing the gene attribute name.
13:02 Changeset in orange-bioinformatics [1739:939281048915] by Ales Erjavec <ales.erjavec@…>
defaultKEGG Pathways widget code style fixes
12:19 Changeset in orange [11439:2a63a9963207] by Ales Erjavec <ales.erjavec@…>
defaultSmall fixes to widget development documentation.

04/08/13:

15:05 Ticket #1217 (Crash with error message 'Singular matrix') closed by lanz
worksforme
14:26 Changeset in orange [11451:c21c7305e28c] by Ales Erjavec <ales.erjavec@…>
defaultFixed a typo in method name.
10:54 Changeset in orange [11450:e9c545633850] by Ales Erjavec <ales.erjavec@…>
defaultMade NewLinkAction an atomic operation.
10:01 Changeset in orange [11449:d6304e011fb4] by Ales Erjavec <ales.erjavec@…>
defaultRefactored link edit interactions code into smaller functions.

04/05/13:

19:43 Changeset in orange-bioinformatics [1738:1f7725e12b25] by Ales Erjavec <ales.erjavec@…>
defaultFixed 'organism_name_search' for KEGG Genome ids.
19:43 Changeset in orange-bioinformatics [1737:729925f75820] by Ales Erjavec <ales.erjavec@…>
defaultKEGG bug fixes.
19:43 Changeset in orange-bioinformatics [1736:b3b664abcfdd] by Ales Erjavec <ales.erjavec@…>
defaultAdded sphinx rst documentation for obiKEGG.
19:43 Changeset in orange-bioinformatics [1735:50499d1dc55a] by Ales Erjavec <ales.erjavec@…>
defaultChanged the Organism.gene_aliases method.
15:02 Changeset in orange [11448:eb79054d35a5] by Ales Erjavec <ales.erjavec@…>
defaultFixed/added editlinksdialog docstrings.
12:05 Changeset in orange [11447:f2279307183c] by Ales Erjavec <ales.erjavec@…>
defaultMoved 'EditLinksWidget' from 'canvas' to 'document' subpackage.
12:05 Changeset in orange [11446:6570f011b27d] by Ales Erjavec <ales.erjavec@…>
defaultFixed a compatibility issue with PyQt4 version 4.7 Binary or-ing of …
12:03 Changeset in orange [11445:9594307a3fe2] by Ales Erjavec <ales.erjavec@…>
defaultMerge

04/03/13:

13:40 Changeset in orange [11438:81793ae1f7d1] by Ales Erjavec <ales.erjavec@…>
defaultFixed a 'ZeroDivisionError' when downloading a zero lenght file.
13:39 Changeset in orange [11437:c4f644fd1c80] by Ales Erjavec <ales.erjavec@…>
defaultAdded 'Last Updated' column to 'OWDatabasesUpdate'
11:05 Changeset in orange [11436:3e57927834a2] by Ales Erjavec <ales.erjavec@…>
defaultCode style fixes for 'OWDatabasesUpdate'.
08:04 Changeset in orange [11435:643328952a43] by Miha Stajdohar <miha.stajdohar@…>
defaultRemoved fink from install scripts.
Note: See TracTimeline for information about the timeline view.