Timeline


and

03/19/14:

16:24 Changeset in orange-bioinformatics [2035:1906078742c3] by Ales Erjavec <ales.erjavec@…>
defaultAdded rst documentation for gene ontology (go).
16:23 Changeset in orange-bioinformatics [2034:48ef02db1ba3] by Ales Erjavec <ales.erjavec@…>
defaultUpdated imports.
16:23 Changeset in orange-bioinformatics [2033:251bf18f12c4] by Ales Erjavec <ales.erjavec@…>
defaultFixed ontology/annotations download.
16:23 Changeset in orange-bioinformatics [2032:4d2b15817f9c] by Ales Erjavec <ales.erjavec@…>
defaultRemoved unused members/constants.
13:18 Changeset in orange [11881:99bec0d8a70d] by Ales Erjavec <ales.erjavec@…>
defaultMore fixes to widget development manual code snippets.
12:29 Changeset in orange [11880:b4ef9ac82685] by Ales Erjavec <ales.erjavec@…>
defaultFixes to widget development manual code snippets.

03/18/14:

17:35 Changeset in orange-bioinformatics [2031:38f16693e400] by Ales Erjavec <ales.erjavec@…>
defaultRenamed Gene Ontology (go) members from camel case to underscore style. …

03/17/14:

15:06 Ticket #1360 (UnicodeDecodeError when clicking <Report> in any widget) reopened by spookey
I'm not sure how to send the changes. I'll leave it open here.
15:00 Ticket #1360 (UnicodeDecodeError when clicking <Report> in any widget) closed by spookey
fixed

03/14/14:

14:55 Changeset in orange [11879:79f4f55e2826] by Ales Erjavec <ales.erjavec@…>
defaultCleanup of 'Orange.utils' import statements.
14:14 Changeset in orange-bioinformatics [2030:0c8f6bd02fa2] by Ales Erjavec <ales.erjavec@…>
defaultFixed biomart caching. Removed global module level cache shelve.
14:14 Changeset in orange-bioinformatics [2029:61f9ca0393e3] by Ales Erjavec <ales.erjavec@…>
default'biomart' code cleanup.
10:40 Changeset in orange [11878:298c32bb4324] by Ales Erjavec <ales.erjavec@…>
defaultAdded 'add_done_callback' method to Future class.

03/13/14:

15:44 Changeset in orange [11877:6abb7ad598f1] by Ales Erjavec <ales.erjavec@…>
defaultFixed liborange.so unlinking step when the symlink is broken.

03/12/14:

17:56 Changeset in orange [11876:a34f5c686869] by Ales Erjavec <ales.erjavec@…>
defaultFixed widget progress bar initialization.
17:56 Changeset in orange [11875:5fd8d0445790] by Ales Erjavec <ales.erjavec@…>
defaultEnsure the NodeItem shows a visual progress indicator even at 0% progress.
17:56 Changeset in orange [11874:ac6743b4c14e] by Ales Erjavec <ales.erjavec@…>
defaultFixed data util helper functions.
15:24 Changeset in orange-bioinformatics [2028:a239d3c44a6c] by Ales Erjavec <ales.erjavec@…>
defaultUpdated obsolete import names.
15:24 Changeset in orange-bioinformatics [2027:043c0c7edcff] by Ales Erjavec <ales.erjavec@…>
defaultAdded 'Select All' keyboard shortcut to Kegg widget.
15:22 Changeset in orange-bioinformatics [2026:d8b0b665f22e] by Ales Erjavec <ales.erjavec@…>
defaultCode cleanup for Kegg widget.
15:20 Changeset in orange-bioinformatics [2025:8d1e33854f7b] by Ales Erjavec <ales.erjavec@…>
defaultFixed/reworked Kegg widget threading.
15:02 Changeset in orange-bioinformatics [2024:87971c3f8062] by Ales Erjavec <ales.erjavec@…>
defaultSmall code fixes for Kegg widget.
13:31 Changeset in orange-bioinformatics [2023:5e045c5ba71a] by Ales Erjavec <ales.erjavec@…>
defaultFixed an UnboundLocalError introduced in 61d9516b43bd

03/11/14:

13:36 Changeset in orange-bioinformatics [2022:f914f46ded94] by Ales Erjavec <ales.erjavec@…>
defaultThreadsafe LogBin._lookup table computation.
12:01 Changeset in orange-bioinformatics [2021:711da9aa19e2] by Ales Erjavec <ales.erjavec@…>
defaultInvalidate sorting when removing filter strings.
09:23 Ticket #1361 (Missing widgets) closed by subjectx
invalid: Two tabs have been created: Visualize and VisualizeQT. The widgets I'm …
09:16 Ticket #1361 (Missing widgets) created by subjectx
Hi, after this bug solved: http://orange.biolab.si/trac/ticket/1359 I'm …

03/10/14:

13:23 Changeset in orange-bioinformatics [2020:61d9516b43bd] by Ales Erjavec <ales.erjavec@…>
defaultUpdated import names.
13:23 Changeset in orange-bioinformatics [2019:b423a892d3bb] by Ales Erjavec <ales.erjavec@…>
defaultEnsure that gene info resources are downloaded with progress reporting.
13:23 Changeset in orange-bioinformatics [2018:8d6287370d07] by Ales Erjavec <ales.erjavec@…>
defaultRemoved a tautological if statement.
12:17 Changeset in orange-bioinformatics [2017:d6d73a05bf1d] by Ales Erjavec <ales.erjavec@…>
defaultRan orange2to25 script on OWGeneInfo.py
12:17 Changeset in orange-bioinformatics [2016:28b8737b2df8] by Ales Erjavec <ales.erjavec@…>
defaultGene Info widget code style fixes.
11:28 Changeset in orange-bioinformatics [2015:2370b2755a4e] by Ales Erjavec <ales.erjavec@…>
defaultMoved deprecated GeneExpressionAtlas code back to deprecated …
11:22 Changeset in orange-bioinformatics [2014:962f21d02561] by Ales Erjavec <ales.erjavec@…>
defaultMore 'arrayexpress' code style fixes.

03/07/14:

13:28 Changeset in orange-bioinformatics [2013:aa4607fe5e9e] by Ales Erjavec <ales.erjavec@…>
defaultUpdated import names.
13:25 Changeset in orange-bioinformatics [2012:ea5486fef30f] by Ales Erjavec <ales.erjavec@…>
defaultGEO Datasets widget code style fixes.
13:21 Changeset in orange-bioinformatics [2011:45bdf06db1bf] by Ales Erjavec <ales.erjavec@…>
defaultFixed an error in STRING DB initialization.
12:47 Changeset in orange-bioinformatics [2010:f10bec27f076] by Ales Erjavec <ales.erjavec@…>
defaultAdded module level common taxid to name mapping.
12:20 Changeset in orange-bioinformatics [2009:49192ce2a035] by Ales Erjavec <ales.erjavec@…>
defaultChanged deprecated import names.
11:59 Changeset in orange-bioinformatics [2008:31506d290c2e] by Ales Erjavec <ales.erjavec@…>
defaultRemoved chunking from STRING DB initialization. The reported speedup is …
11:46 Changeset in orange-bioinformatics [2007:48c5637a3fec] by Ales Erjavec <ales.erjavec@…>
defaultFixed STRING database initialization progress reporting
11:46 Changeset in orange-bioinformatics [2006:82d6e864fc63] by Ales Erjavec <ales.erjavec@…>
defaultSlight fixup for BioGRID database initialization.
11:43 Changeset in orange-bioinformatics [2005:3253c6e19022] by Ales Erjavec <ales.erjavec@…>
defaultCode style fixes (pep8).

03/06/14:

18:16 Changeset in orange-bioinformatics [2004:49eb6e1207f3] by Ales Erjavec <ales.erjavec@…>
defaultUsing ThreadExecutor for dataset download.
12:21 Ticket #1360 (UnicodeDecodeError when clicking <Report> in any widget) created by chemist69
When the file widget is used with any data, e.g. the example iris.tab, …

03/05/14:

13:11 Changeset in orange-bioinformatics [2003:851fbcd1cc7a] by Ales Erjavec <ales.erjavec@…>
defaultSmall fixes to the ontology docstrings.
08:32 Ticket #1359 (Windows 7 64bit - Orange Canvas wont run) created by subjectx
Hi, After installing from …

03/03/14:

15:54 Changeset in orange-bioinformatics [2002:bebeeae74628] by Ales Erjavec <ales.erjavec@…>
defaultAdded 'arrayexpress' doctests.
15:53 Changeset in orange-bioinformatics [2001:ee88879257cf] by Ales Erjavec <ales.erjavec@…>
default'arrayexpress' code style and docstring fixes.
12:56 Changeset in orange [11873:db28938685a3] by Ales Erjavec <ales.erjavec@…>
defaultUse a single global instance of _TaskDepotThread.
11:51 Changeset in orange-bioinformatics [2000:b28eccdf92cd] by Ales Erjavec <ales.erjavec@…>
defaultRefactored GEO initialization.
11:40 Changeset in orange-bioinformatics [1999:c60995640805] by Ales Erjavec <ales.erjavec@…>
defaultThreaded widget initialization.
11:32 Changeset in orange-bioinformatics [1998:f88284e0fddb] by Ales Erjavec <ales.erjavec@…>
defaultAdded download utilities.
11:02 Changeset in orange-bioinformatics [1997:f39504393979] by Ales Erjavec <ales.erjavec@…>
defaultReplaced the use of signal manager freeze with widget blocking state.
10:59 Changeset in orange [11872:872337b35d3c] by Ales Erjavec <ales.erjavec@…>
defaultFixed an AttributeError in DragStartEventListener. The 'buttonDownObj' …

02/28/14:

15:57 Changeset in orange-bioinformatics [1996:7194056139bb] by Ales Erjavec <ales.erjavec@…>
defaultFixed graphviz export, removed unused code.

02/27/14:

14:50 Changeset in orange-bioinformatics [1995:ab90baa38e10] by Ales Erjavec <ales.erjavec@…>
defaultFixed 'ontology' module name in the documentation.
14:24 Changeset in orange-bioinformatics [1994:633673fab61f] by Ales Erjavec <ales.erjavec@…>
defaultNormalized whitespace (and other pep8 fixes).

02/26/14:

17:54 Changeset in orange [11871:be57aa910cf9] by Ales Erjavec <ales.erjavec@…>
defaultChanged image scaling (zoom). The final shown image size is based on the …
16:44 Changeset in orange [11870:6f11f5c08cd4] by markotoplak
defaultAdded prostate.tab.
16:37 Changeset in orange [11869:0f2b07be78bb] by markotoplak
defaultDo not load addon shelve on startup.
10:55 Changeset in orange [11867:9b1b91c43afd] by Ales Erjavec <ales.erjavec@…>
defaultIncreased the pixmap size range.

02/25/14:

16:39 Changeset in orange [11866:b108697119a2] by Ales Erjavec <ales.erjavec@…>
defaultImplemented flow layout for image viewer.
14:53 Changeset in orange [11865:caa4c3be9956] by Ales Erjavec <ales.erjavec@…>
defaultShow error (exception string) in tool-tip.
13:10 Changeset in orange-bioinformatics [1993:81dc3fe3ed6c] by markotoplak
defaultRemoved pointless printout.
12:19 Changeset in orange [11864:a6ab0b963be1] by Ales Erjavec <ales.erjavec@…>
defaultChanged image layout.

02/24/14:

18:02 Changeset in orange [11863:f51ea5e8a0e7] by Ales Erjavec <ales.erjavec@…>
defaultFixed image layout.
15:33 Changeset in orange [11862:1b448771cdf4] by Ales Erjavec <ales.erjavec@…>
defaultFixed an error in reseting the widget state.
14:43 Changeset in orange-bioinformatics [1992:ef31099d4f65] by Ales Erjavec <ales.erjavec@…>
defaultAdded a warning about the deprecated API when using obiGeneAtlas.
14:05 Changeset in orange [11861:47db65775b13] by Ales Erjavec <ales.erjavec@…>
defaultUse one global QNetworkAccessManager instance for image retrieval.
12:45 Changeset in orange [11860:187f074a207b] by Ales Erjavec <ales.erjavec@…>
defaultLoad images over the network.

02/21/14:

19:01 Changeset in orange [11859:842c6caad09c] by Ales Erjavec <ales.erjavec@…>
defaultKeep aspect ratio of the images.
18:58 Changeset in orange [11858:2425642fce59] by Ales Erjavec <ales.erjavec@…>
defaultCleanup of Image Viewer's helper classes.
18:56 Changeset in orange [11857:0e563bd14e60] by Ales Erjavec <ales.erjavec@…>
defaultImage Viewer code style fixes.
11:48 Changeset in orange-bioinformatics [1991:8f60c5205094] by Ales Erjavec <ales.erjavec@…>
defaultFixed module imports for doctests.
11:32 Changeset in orange-bioinformatics [1990:10d2bf077da7] by Ales Erjavec <ales.erjavec@…>
defaultCleared the namespace package.
10:44 Changeset in orange-bioinformatics [1989:4b63ff0fcef3] by markotoplak
defaultDo not show warning as a submodule of Orange.bio.
10:25 Changeset in orange-bioinformatics [1988:5e0ece4e4ab0] by markotoplak
defaultMoved obiGeneSets and obiGeneSetSig.

02/20/14:

16:01 Changeset in orange-bioinformatics [1987:d277e3cbf642] by markotoplak
defaultRemoved obiDifscale and its widgets (now in separate addon).
15:54 Changeset in orange-bioinformatics [1986:9bf72239e036] by markotoplak
defaultFixed imports so that less obi modules are visible from Orange.bio.
15:45 Changeset in orange-bioinformatics [1985:5e0898e89731] by markotoplak
defaultLoad gsea at startup.
15:25 Changeset in orange-bioinformatics [1984:14410a903d98] by markotoplak
defaultMoved obiGsea.
14:07 Changeset in orange-bioinformatics [1983:4b0974e3d84b] by markotoplak
defaultMoved obiPPI.
12:08 Changeset in orange [11856:94ef1ad1a863] by Ales Erjavec <ales.erjavec@…>
defaultFixed a error in MDS widget.

02/19/14:

20:30 Changeset in orange-bioinformatics [1982:51bab280012f] by markotoplak
defaultMoved obiDicty*.
19:11 Changeset in orange-bioinformatics [1981:f1cf338e5978] by markotoplak
defaultMoved obiChem.
19:08 Changeset in orange-bioinformatics [1980:e8f5310fa033] by markotoplak
defaultMoved obiKEGG.
19:08 Changeset in orange-bioinformatics [1979:4c257656d1af] by markotoplak
defaultFixed import in moved obiGene.
19:02 Ticket #1358 (Scatter Plot Multiplied Legend Items) closed by Ales Erjavec <ales.erjavec@…>
fixed: In [018a5956016cab7065fc2175f315c1bee4e00b62/orange]: […]
19:01 Changeset in orange [11855:018a5956016c] by Ales Erjavec <ales.erjavec@…>
defaultDetach all legend items from the plot when updating. (fixes #1358)
18:58 Ticket #1358 (Scatter Plot Multiplied Legend Items) created by ales
After saving a Scatter Plot as an image the legend contains more items …
17:03 Changeset in orange-bioinformatics [1978:0a9dfd5d99c0] by markotoplak
defaultMoved obiOntology.
16:54 Changeset in orange-bioinformatics [1977:bae2d80f192b] by markotoplak
defaultMoved obiMeSH.
16:50 Changeset in orange-bioinformatics [1976:6cf58a63b515] by markotoplak
defaultArrayexpress backward compatibility.
16:47 Changeset in orange-bioinformatics [1975:5b0b06589b24] by markotoplak
defaultDeleted obiData and obiGenomicsUpdate because they were not used anywhere.
16:38 Changeset in orange-bioinformatics [1974:59409de6bd05] by markotoplak
defaultMoved obiBioMart.
16:34 Changeset in orange-bioinformatics [1973:ac6b1edf56cb] by markotoplak
defaultMoved obiArrayExpress.
16:26 Changeset in orange-bioinformatics [1972:9977249ed2a0] by markotoplak
defaultMoved obiTaxonomy.
16:18 Changeset in orange-bioinformatics [1971:f1b0296514d5] by markotoplak
defaultMoved obiGO.
16:12 Changeset in orange-bioinformatics [1970:8273db8050aa] by markotoplak
defaultMoved obiExperiments.
16:03 Changeset in orange-bioinformatics [1969:ea2291c91d52] by markotoplak
defaultMoved obiOMIM.
15:58 Changeset in orange-bioinformatics [1968:43c03e5f047f] by markotoplak
defaultBackward compatibility for gene.homology.
15:57 Changeset in orange-bioinformatics [1967:d77f0590f5c6] by markotoplak
defaultMoved obiHomoloGene.

02/18/14:

18:57 Changeset in orange-bioinformatics [1966:87dbac8b8906] by Ales Erjavec <ales.erjavec@…>
defaultRemoved uses of obiGenomicsUpdate from obiGO. Moved update code to …
18:43 Changeset in orange-bioinformatics [1965:75ebb26214cf] by Ales Erjavec <ales.erjavec@…>
defaultRemoved use of obiData module in geo.
18:42 Changeset in orange-bioinformatics [1964:c91658a72af1] by Ales Erjavec <ales.erjavec@…>
defaultRemoved uses of obiGenomicsUpdate and obiData from obiTaxonomy. Moved …
16:07 Changeset in orange-bioinformatics [1963:06fcc6b53c8c] by markotoplak
defaultRemoved Gary Strangman's stats.py.
16:02 Changeset in orange-bioinformatics [1962:d35f315a7d08] by markotoplak
defaultMoved obiExpression -> utils.expression. Removed dependencies on old Gary …
15:28 Changeset in orange-bioinformatics [1961:3cffa0f0cf0e] by markotoplak
defaultRemove dependencies for stats in obiGeneSetSig.
14:59 Changeset in orange-bioinformatics [1960:eb3b4e9bbb4c] by markotoplak
defaultobiProb backward compatibility.
14:58 Changeset in orange-bioinformatics [1959:5fb1e8afe0fa] by markotoplak
defaultMoved obiProb -> utils.stats.
14:49 Changeset in orange-bioinformatics [1958:42eb39d0cf73] by markotoplak
defaultobiGEO and obiGene for backward compatibility.
14:48 Changeset in orange-bioinformatics [1957:a1ac47c53c43] by markotoplak
defaultRenamed obiGene and obiGEO.

02/17/14:

18:37 Changeset in orange [11854:975cc3daadf3] by Ales Erjavec <ales.erjavec@…>
defaultFixed NodeItem progress state initialization and updating. Progress …
17:46 Changeset in orange [11853:41a3f530528c] by Ales Erjavec <ales.erjavec@…>
defaultInitialize the tracked processing state property.
09:43 Changeset in orange-bioinformatics [1956:4504c102a4bb] by markotoplak
defaultVersion bump.
09:42 Changeset in orange-bioinformatics [1955:9b187b15f253] by markotoplak
defaultobiGeneSetSig: pca refactor.
Note: See TracTimeline for information about the timeline view.