Changes between Version 84 and Version 85 of GSoC/Ideas


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Timestamp:
03/31/13 19:08:36 (18 months ago)
Author:
blaz
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  • GSoC/Ideas

    v84 v85  
    6060 
    6161Possible mentors: Marko 
     62 
     63=== Bioinformatics add-on === 
     64 
     65Bioinformatics add-on extends Orange both in scripting and with a set of widgets. The aim of the add-on is for biologists to easily explore various data sources and used them for integrative data mining. Present functionality includes gene set enrichment (GO, KEGG, NCBI's  MeSH), gene selection, visualization of heatmaps and access to various specialized data bases (GEO, BioMart, Atlas, NCBI Gene). The library requires an update, development of unit tests for scripts, documentation for widgets, and addition of new data sources, first in scripts then in widgets.  
     66 
     67Useful skills: Python, some knowledge on bioinformatics and related public data bases 
     68 
     69Level from 1 (beginner) to 5 (professional): 4. 
     70 
     71Possible mentors: Blaz